Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq21138 86.0 6e-12 seq5748 82.4 7e-11 >seq21138 Length=28562 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || |||||||| | || | || || Sbjct 13223 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCT 13164 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | |||||| ||||| ||||| |||||||| || || || Sbjct 13163 TCCGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGAC 13104 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | | |||| || ||| || || || || |||| | | | | |||||| Sbjct 13103 CAGCAGCGTTTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACTCTTGCCGACTAC 13044 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| ||||||| || || Sbjct 13043 AACATCCAGAAGGAGTCCACTCTCCATCTCGTGCT 13009 >seq5748 Length=24579 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/168 (72%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 26830 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAAC 26889 ||||||| | | || ||| ||||||| ||||||||||| || || | ||||||| Sbjct 10359 ACACCATTAACAATGTTAAAGCAAAGATTGAAGACAAAGAAGGAATTCCCTCAGATCAAC 10300 Query 26890 AAAGACTCATTTACGGCGGCAAACAACTCGAAGATGAT-AGAAACGTCAGC-GACTATAA 26947 ||||| | | | || || |||||| | | |||||| | | || | || || || || Sbjct 10299 AAAGATTAGTATTTGGTGGAAAACAATTTAAGGATGATCATACACTT--GCTGATTACAA 10242 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| || ||||| ||| |||| ||| | ||||| Sbjct 10241 TATTCAAAAGGAGTCTACAATTCATCTTGTCTTGAGTCTTTGTGGAGG 10194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478383615051680