Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq8951 96.9 3e-15 seq11273 91.5 1e-13 >seq8951 Length=56096 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 |||||||||||| | || |||||||| ||||| |||| ||| || |||||||| ||| Sbjct 33787 GATAAAGAAGGCATACCTCCGGATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAA 33846 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | |||| |||| ||||| |||||||| ||||| || ||| | || | || || Sbjct 33847 GATGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTTCTG 33906 Query 115499 AGATTGCGAGGAGGAA 115514 || | | ||||||| Sbjct 33907 AGGCTCAGGGGAGGAA 33922 >seq11273 Length=79338 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 ||||| || |||||||| || || || ||||| ||||| ||| | ||| || || | Sbjct 31736 ATGCAGATCTTTGTCAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTC- 31794 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| ||| ||| |||| || || |||||| ||||| ||||| | || || Sbjct 31795 -CGATACTATTG-ACAACGTGAAGGCCAAAATTCAGGATAAGGAAGGGATTCCTCCAGAC 31852 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| ||||| || | ||| ||||| ||| | || |||| | ||| |||| || || Sbjct 31853 CAGCAGAGACTGATCTTTGCCGGCAAGCAACTCGAGGATGGAAGGACCCTGGCTGACTAC 31912 Query 115463 AACATTCAAAAAGAGTCTACTATACAT 115489 || ||||| ||||||||||| ||||| Sbjct 31913 AATATTCAGAAAGAGTCTACCTTACAT 31939 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CG-GAGTCCA 115343 ||||| || ||||| || || ||||| ||||| ||||| || | || || |||| | Sbjct 31280 ATGCAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTCT 31339 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | || ||| || ||| || || |||||| | || |||| Sbjct 31340 G--ACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATC 31397 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| ||||| || | ||| || ||||| | ||||||| | ||| | || ||||| | Sbjct 31398 AGCAGAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACA 31457 Query 115464 ACATTCAAAAAGAGTCTAC 115482 |||| |||||||||||||| Sbjct 31458 ACATCCAAAAAGAGTCTAC 31476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425102462295280