Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4177 104 4e-17 >seq4177 Length=96264 Score = 104 bits (114), Expect = 4e-17 Identities = 287/436 (66%), Gaps = 13/436 (3%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||| || |||||||| ||||||||||| |||||||| || ||||||||| Sbjct 66534 CTTGCCTTTTTTGCCGCCTCAGACGGCATAGTTTTAGAGAACCTCGCTGGAAGGTTCATG 66593 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCAGATAGCCATAGAGAA 42541 ||||| || ||| ||||| || ||| ||||| || ||||| || ||||| ||||| Sbjct 66594 AAAGATGTCCAGGTTGCCGAGGCTCG-TGCTTTCTATGGGTTCCAAATCGCCATTGAGAA 66652 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | || || ||| ||||| ||| | | |||||||| |||| | | ||| Sbjct 66653 TATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGATTCTGACGA--- 66709 Query 42602 TAACGGGC----TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 || | || ||||| || || ||||| || || || | | ||||||||| | | Sbjct 66710 -AAAGAGCAAATTGTTCCGTGCAATTGAGACAATCCCTTGTGTTGAAAAGAAGGCGAAAT 66768 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 |||| || |||||||| | | || ||| |||| ||| | |||| || ||| Sbjct 66769 GGGCCCTTCGTTGGATCGATGGGTCTGA---AACTTTCGCGGAGCGTTTGGTGGCTTTTG 66825 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 | || || || || |||||| || |||| || || || ||| | || | Sbjct 66826 CTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTTTGGTTGAAAAAAC 66885 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGC 42837 || || ||||| ||| | |||||||| || || | || || ||||| || ||| Sbjct 66886 GGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGC 66945 Query 42838 ATAGGGACTTTGCCTG 42853 | | || ||||| || Sbjct 66946 ACTGTGATTTTGCGTG 66961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943789193241440