Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq25728 127 3e-24 seq5004 118 1e-21 >seq25728 Length=33906 Score = 127 bits (140), Expect = 3e-24 Identities = 308/455 (68%), Gaps = 16/455 (4%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| || ||||| | || | || ||||| ||||| | ||||| ||||| || Sbjct 13698 ATCAAATCGTCCTGGCCTCAGCAAAGCAGAGTCAAGAATATCTGCACGATTGGTTGCCGC 13757 Query 15947 GATGACAACAATACCTGT--TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | || | ||||| || ||| || | ||||||||||| || ||||| || ||||| Sbjct 13758 AACAACTATTATACCAGTATTTCCTT--CGAAACCATCCATTTCAGTCAATAGTTGGTTC 13815 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 16062 | || ||||||| ||||||||| || | | | | |||| | | |||| || | Sbjct 13816 AGGGTCTGTTCCCTTTCATCATTTCCT--CCTCCAATTCCAGTCCCTCTTTGCCGCCCAA 13873 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTT-CGCGAGCGACTTCAAAG 16121 | |||||||| ||||||| || || ||||| || ||||| | | | ||| ||| Sbjct 13874 CAGCATCAATTTCATCAACAAATACAATGCAAGGAGCATTTTCCTTGGCCTTCTTGAAA- 13932 Query 16122 AGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 16181 ||||| || || || ||| || ||||||||||||||||| || || | || | ||| Sbjct 13933 AGATCACGGACTCGAGAGGCTCCAACACCAACAAACATCTCAACGAATTCTGAACCTGAA 13992 Query 16182 CATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240 |||| || || || ||| | |||||| ||||| || || || | || || || Sbjct 13993 -ATTGAGAAAAATGGAACACCCGCTTCACCAGCAATTGCCTTTGCTAGCAAGGTTTTCCC 14051 Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGT- 16299 ||||| || ||| | || || ||||| ||||| | | ||| || | ||| Sbjct 14052 AGTACCAGGAGGACCAACAAGAAGAACACCTTTTGGAA--TACGAGCCCCTACTGCAGTA 14109 Query 16300 -ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 |||||||||||| ||| | ||| || || | ||| Sbjct 14110 AATCTCTCAGGTTTCTTCAAAAATTCTACGACCTC 14144 >seq5004 Length=42262 Score = 118 bits (130), Expect = 1e-21 Identities = 197/279 (71%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || ||||||||||| |||||||| || |||| |||||||| | Sbjct 9410 AACCCATCCATTTCAGTCAAAAGCTGATTAATAGTCTGCTCCCTCTCATCATTTCCACCT 9469 Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 | ||| |||| | |||| ||||||| ||||||||||||||||| || || || || Sbjct 9470 CCAAGACCTGCACCTCTTTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATACAA 9529 Query 16095 GGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACACC 16150 || ||||| | || ||||| | ||||| || || || | || |||||||| Sbjct 9530 GG--CGCTTTCGACTTTGCCTTCTCAAACAAATCCC-TA-ACTCTAGAAGCTCCCACACC 9585 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 ||||||| ||| ||||| | || || | ||| || || || ||| || ||||| Sbjct 9586 CACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAATGGCACACCAGCCTCACC 9645 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 || | |||| || | ||| ||||| || |||||||| Sbjct 9646 AGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 9684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620380864107680