Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq20339 208 2e-49 seq12053 127 6e-25 seq94 116 1e-21 seq8506 98.7 3e-16 seq24164 95.1 4e-15 seq7295 84.2 6e-12 >seq20339 Length=39107 Score = 208 bits (230), Expect = 2e-49 Identities = 582/888 (66%), Gaps = 40/888 (5%) Strand=Plus/Plus Query 25902 TTGCCTTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCT 25961 |||||||| | || || || || ||||| || ||||| || | ||| | |||| | | Sbjct 1470 TTGCCTTCCTTGCTGCTCCTCCAGTAGACATTGATGGTATTCATGAAACTTTTTCAAGGT 1529 Query 25962 CGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCG 26021 | | | || |||||||| || || | ||| | | || | ||| | |||| | Sbjct 1530 CTATTCTTTATGGAAACAACATGATTT-----GCACTTCTGCCTACTTCTGCCACAATAG 1584 Query 26022 GACTACATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGC 26080 | ||||||||||||| |||||||||| |||| | | || || ||| |||||||||| Sbjct 1585 GTTTACATTTTTACCCAATCTGGGAAG-AGGCATCCGTTGATGAATGGTTATACAATGGT 1643 Query 26081 GGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGA 26140 | || ||| |||| ||| | | ||||||||| | |||||| | || || | Sbjct 1644 TGCCCTTATGAACTAATTTTTCTACACTTCTTACTTGGAGTATCTTGTTACATGGGTCGT 1703 Query 26141 CAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCA 26200 ||||||| || || | || || | | ||| | ||| ||||||||| | || | Sbjct 1704 GAGTGGGATCTTAGTTTCCCTCTGGGTACGCCACCTTAGATTGTTGTTGCATGTTCAACT 1763 Query 26201 CCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAG-TTTTAG 26259 || | | || || ||||| | |||||| | | || | || ||||| || |||| Sbjct 1764 CCCATTGCAGCTACTATCGCATTTTTCTTAATCAACCCAATAGGTCAAGGAAGTTTTTTT 1823 Query 26260 TGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGA 26319 | || | |||||||| || || || ||||||| || || ||| | ||||| | || Sbjct 1824 TAATCGTATGCCTCTAGGATTCGCTAGTACTTTCAATTTCATGATTTTATTCTTGGATGA 1883 Query 26320 ACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGC 26379 ||| || || || ||||||| ||| || || || |||| |||||| ||||| || | Sbjct 1884 ACACAACATCCTTATGCACCTATTTCACTTGATAGGAGTTGTTGGGGTATTCGGCGGCTC 1943 Query 26380 TCTTTTCGCTGCTATGCACGGAAGTT---TGGTTACTTCCTCACTTATTGCAGAAACGAC 26436 || ||| | ||||| | | || |||| ||| || | || ||| | | Sbjct 1944 CCTATTCAGTTCTATGAA---TATTTCAATGGTAACT--CT-AGTTCGATCAGGGAACCC 1997 Query 26437 AGAGGAAGT--CTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAAT 26494 | || |||| || ||| | || || | || || ||||| ||||| || |||||| Sbjct 1998 ATAGAAAGTGAATCTGCTAATGAAGGTTACAGATTGGGTCAAGAGGAAGAAACTTATAAT 2057 Query 26495 ATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAAC 26554 | || | | || || || ||||| ||| || || || ||||| ||||| || ||| Sbjct 2058 AACGTATCCACTCATGGTTATTTTGGCCGATGGATCTTCCAATATGCTAGTTTCAACAAC 2117 Query 26555 AGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCT 26614 ||| | |||||| | || | | ||||||| || || | || | | | || || Sbjct 2118 TCTTATTCGTTACATTTCATCCTAGTTGCTTGGCCTGTAGTATGTATCTAGTTTACCCCT 2177 Query 26615 ATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTA 26674 | |||||| ||| ||||| ||||||||||||| ||| || || ||||| || | ||| Sbjct 2178 TTAGGTATCAACACTATGGCTTTTAACCTAAATGATTTCAATTTCAACCAATCTGCAGTT 2237 Query 26675 GATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGC 26734 || | | || | ||||| ||| | | |||||||| || Sbjct 2238 GACAGTCAGGGTTATATAAT-----------------TAT----CTGTGCTAACCTTGGT 2276 Query 26735 TTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTA 26782 | ||||||||||| || ||||||||||||||||| || || ||| || Sbjct 2277 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 2324 >seq12053 Length=52445 Score = 127 bits (140), Expect = 6e-25 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 26559 GTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGG 26618 |||| | || ||||| || ||| ||||||| || || | || ||| | | || | | Sbjct 51485 GTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTACGTATCTGGTTTATCGCTTTAG 51426 Query 26619 GTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATG 26678 ||||| |||| ||||| || |||||||||||||| | || ||||| || ||||| || Sbjct 51425 GTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAGTTTCAACCAATCTGTAGTTGACA 51366 Query 26679 TTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTG 26738 | | || |||| || ||||||||| | | |||| |||||||| || | | Sbjct 51365 GTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCRTGCTAACCTTGGTATGG 51306 Query 26739 AAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACT 26780 |||||||||| || ||||||||||||||||| || || |||| Sbjct 51305 AAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACT 51264 >seq94 Length=189492 Score = 116 bits (128), Expect = 1e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 26567 CATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGC 26626 || ||||| | ||| ||||||| || || || || ||| | || || | |||||| || Sbjct 81679 CACTTCTTCCGAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGC 81620 Query 26627 ACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGG 26685 || ||||| || |||||||||||||| || || ||||| || ||||| ||| || | || Sbjct 81619 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAGTGT 81560 Query 26686 AAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTAT 26745 | | |||| || ||||| ||| | | ||||| |||||||| || |||||||||| Sbjct 81559 CATG-TAATTAACACTTGGGCCGATATCATCAACCGTGCTAACCTTGGTATTGAAGTTAT 81501 Query 26746 GCACGAGCGTA 26756 ||| || |||| Sbjct 81500 GCATGAACGTA 81490 Score = 113 bits (124), Expect = 1e-20 Identities = 141/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 26567 CATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGC 26626 || ||||| | ||| ||||||| || || || || ||| | || || | |||||| || Sbjct 88208 CACTTCTTCCGAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGC 88149 Query 26627 ACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGG 26685 || ||||| || |||||||||||||| || || ||||| || ||||| ||| || | || Sbjct 88148 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAGTGT 88089 Query 26686 AAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTAT 26745 | | |||| || ||||| ||| | | ||||| |||||||| || | |||||||| Sbjct 88088 CATG-TAATTAACACTTGGGCCGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTAT 88030 Query 26746 GCACGAGCGTA 26756 ||| || |||| Sbjct 88029 GCATGAACGTA 88019 >seq8506 Length=47589 Score = 98.7 bits (108), Expect = 3e-16 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 26252 AGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTC 26311 |||||| |||||| |||||||| || |||||||||||||| || || ||| | |||||| Sbjct 40171 AGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTC 40112 Query 26312 CAAGCAGAACATAATATACTCATGCACCCATT 26343 ||||| ||||| || || || ||||||||||| Sbjct 40111 CAAGCTGAACACAACATCCTTATGCACCCATT 40080 >seq24164 Length=10202 Score = 95.1 bits (104), Expect = 4e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 26241 TCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTA 26300 |||| |||| |||||| ||||| |||||||| || ||||||||||||| || || | Sbjct 3440 TCGGTTAAGGAAGTTTTTCTGATGCTATGCCTCTAGGAGTCTCTGGTACTTTCAATTTCA 3499 Query 26301 TGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTG 26360 || | ||||||| || ||||| || || || |||||| ||| |||||| | ||| Sbjct 3500 TGATTATATTCCAGGCTGAACACAACATCCTTATGCACTTATTTCATATGTTAGATGTAT 3559 Query 26361 CTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCT 26392 || |||| ||||| || | || ||| |||| Sbjct 3560 CTAGGGTATTCGGCGGCTCCCTATTCAGTGCT 3591 >seq7295 Length=63598 Score = 84.2 bits (92), Expect = 6e-12 Identities = 183/272 (67%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 26285 GGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTC 26344 |||||||| || || || | |||| || || || || || || || ||||||||||| Sbjct 43838 GGTACTTTGAATTTCCTGATTTTATTTCAGGCTGAGCACAACATCCTTATGCACCCATTT 43897 Query 26345 CATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGT 26404 || || || | ||||| || |||||| | || ||| ||||||||| || | Sbjct 43898 CACATCTTAGGCCTAGCTGGTGTAAAAGGTGGATCCCTATTCAGTGCTATGCA--TAATT 43955 Query 26405 --TTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCT 26462 ||||| ||||| ||||| |||| ||| | | | || ||| | || | Sbjct 43956 CCTTGGTAACTTCTAGTTTTATTAGGGAAAGCACAAAAAATGAATCTGCTAATGAAGGTT 44015 Query 26463 ATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGA 26522 | | |||| ||||| ||||| || || |||||||| || || || | || ||||| Sbjct 44016 AAATATTTGTTCAAGAAGAAGAAACTTAGAATATTGTAGCCGCTCATGCTTATTTTGGAC 44075 Query 26523 GATTAATTTTTCAGTATGCGAGTTTTAATAAC 26554 |||| || || || ||||| ||||| || ||| Sbjct 44076 GATTGATCTTACAATATGCTAGTTTCAACAAC 44107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146645215732656