Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq11446 98.7 2e-15 seq437 96.9 8e-15 >seq11446 Length=16521 Score = 98.7 bits (108), Expect = 2e-15 Identities = 324/494 (66%), Gaps = 16/494 (3%) Strand=Plus/Plus Query 150310 AGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGATTC 150368 ||| ||||||||||| | |||||| | || ||| || || || |||||| ||||| Sbjct 1758 AGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATTCGAAGAG-TAATTCGGATTC 1816 Query 150369 TTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAAC 150426 | || | | || || || ||| |||| ||| ||||||| || |||||||||||||| Sbjct 1817 TATCGAGGAGGACAAAGAACAATCCAGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAAAAC 1874 Query 150427 ACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAA 150486 | | ||||| || |||||||| | || | | || ||||||||| | || Sbjct 1875 AGCTGTAGTTGAAGGGCTAGCACAAAGGATAGTTCGAGGGGATGTTCCAAGCAATTTGGC 1934 Query 150487 AGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGG 150546 |||||| || | | ||| ||||||| ||| | | |||||| | ||||| | || Sbjct 1935 TGATGTTAGGCTTATAGCATTGGATATGGGAGCACTCATTGCTGGAGCAAAGTACAGAGG 1994 Query 150547 TGAATTCGAAGAACG--TGTAGACAATTTGCTACAAGAACTAAAAGAACGCGATG---AT 150601 |||||| ||||| | || || | | | || | ||| | |||| || | | Sbjct 1995 TGAATTTGAAGAGAGGTTGAAGGC--TGTTCTGAAGGAAGTGGAAGATGCAGAAGGGAAA 2052 Query 150602 GTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGT 150661 || ||||| ||||| ||||| ||||| || | ||||||||| |||| | || Sbjct 2053 GTAATTCTCTTCATTGATGAGATCCACTTGGTTTTAGGTGCTGGTAGGACT---GAAGGA 2109 Query 150662 TCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTCATC 150721 || ||||| |||| |||| ||||| || |||| || || | | ||| Sbjct 2110 TCAATGGATGCTGCCAATTTGTTCAAACCAATGCTTGCTCGGGGCCAATTAAGGTGCATT 2169 Query 150722 GGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGCGT 150781 |||||||||||| || || || | || | | || |||||||| ||| | | | Sbjct 2170 GGTGCAACAACCCTGGAAGAGTACAGGAAGTATGTGGAGAAAGATGCTGCATTCGAAAGG 2229 Query 150782 CGTTTCATGAAGGT 150795 |||||| | |||| Sbjct 2230 CGTTTCCAGCAGGT 2243 >seq437 Length=49108 Score = 96.9 bits (106), Expect = 8e-15 Identities = 178/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| ||||||||||| | |||||| | || ||| || || || | |||| || Sbjct 3912 AGCAGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATTCGAAGAG-TGATTCGGA 3970 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAA 150423 |||| || | | || || || ||| ||||| ||| ||||||| || ||||||||||| Sbjct 3971 TTCTATCGAGGAGGACAAAGAACAATCCGGTGC-TTA-TTGGTGAGCCTGGTGTTGGTAA 4028 Query 150424 AACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTAT 150483 |||| | ||||| || |||||||| | |||| | || ||||||||| | | | Sbjct 4029 AACAGCTGTAGTTGAAGGGCTAGCACAAAGGATCGTTCGAGGCGATGTTCCAAGTAATTT 4088 Query 150484 GAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCG 150543 | ||||| | | | ||| ||||||| ||| | | |||||| || ||||| | Sbjct 4089 GGCTGATGTCAGGGTGATCGCATTGGATATGGGAGCACTCATTGCTGGAACAAAGTACAG 4148 Query 150544 TGGTGAATTCGAAGA 150558 |||||||| ||||| Sbjct 4149 AGGTGAATTTGAAGA 4163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146905305027812