Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq8951 95.1 1e-14 seq11273 89.7 4e-13 >seq8951 Length=56096 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| |||||||| || ||||| || ||||||||||||||| || ||| |||| ||| Sbjct 33808 GATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAAGATGGTAGAACCCTGGCTGAT 33867 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCAC 28757 || |||||||| |||||||| ||||| ||| Sbjct 33868 TACAACATTCAGAAAGAATCAACTCTTCAC 33897 >seq11273 Length=79338 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||||| || || || || ||||| || || |||| Sbjct 31964 ATGCAAATATTTGTCAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCA 32023 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || ||| ||| ||||| ||||| | || ||| || Sbjct 32024 GATACTATCGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 32083 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| | || ||| | || |||| ||||| ||| Sbjct 32084 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAAC 32143 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || |||||| Sbjct 32144 ATTCAGAAAGAATCAACCCTGCAC 32167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425163227769126