Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq11273 87.8 3e-12 seq8951 87.8 3e-12 >seq11273 Length=79338 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || ||| | || ||||| || || ||| |||| || || | | Sbjct 31281 TGCAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTCTG 31340 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||| || ||| || ||||||||||| || ||||| | Sbjct 31341 ACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAGC 31400 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || ||||| | || ||| |||| | | ||||| || | Sbjct 31401 AGAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACA 31460 Query 146212 TACAAAAAGAATCGAC 146227 | |||||||| || || Sbjct 31461 TCCAAAAAGAGTCTAC 31476 >seq8951 Length=56096 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 146126 TAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 |||||||||||| || || ||||| || ||||| |||||||| || |||||||| || || Sbjct 33789 TAAAGAAGGCATACCTCCGGATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAAGA 33848 Query 146186 TAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACT 146228 | |||||| | | ||||| || || || |||||||| ||| Sbjct 33849 TGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACT 33891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785708517034480