Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22]
46,594 sequences; 665,186,956 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq11273 176 9e-39
seq30 159 7e-34
seq29 141 2e-28
seq1518 132 9e-26
seq8314 131 3e-25
seq8951 125 1e-23
seq2718 116 7e-21
seq5748 104 5e-17
seq17061 87.8 4e-12
seq3191 86.0 1e-11
>seq11273
Length=79338
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||| | || ||||| | |||||| || ||||||||||| || || ||||| |
Sbjct 32190 CCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 32131
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || || || ||||| |||||||||||||| | ||| || || ||||||||
Sbjct 32130 AACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGA 32071
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||| ||||||||||| ||||| || || ||||| | || ||
Sbjct 32070 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACC 32011
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 32010 TCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 31964
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||||||||| || | || ||||| || || ||||| || || || || |
Sbjct 32418 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 32359
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | || ||||| || |||||||| ||||||||||| | | ||||| ||||| ||
Sbjct 32358 AGAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 32299
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||||||||||||||| ||||| ||||| ||||| | || ||
Sbjct 32298 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 32239
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || ||||| ||||| ||||| || |||||
Sbjct 32238 TCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 32192
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||||||||| || | || ||||| || || ||||| || || || || |
Sbjct 32646 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 32587
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | || || || || |||||||| ||||||||||| | | ||||| ||||| ||
Sbjct 32586 AGAGTCCTCCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 32527
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||||||||||||||| ||||| ||||| ||||| | || ||
Sbjct 32526 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 32467
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 32466 TCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 32420
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || || ||||| ||||| || || || ||||||| || ||| ||
Sbjct 31495 ACGGAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 31436
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 31435 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTT 31376
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| ||||| ||||| ||||| || ||| | || || || | ||| ||
Sbjct 31375 GTCTTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGAT 31316
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || | ||||| ||||||||||||||
Sbjct 31315 GGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 31280
Score = 154 bits (170), Expect = 3e-32
Identities = 158/204 (77%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| |||||||| || ||||| || | || | | || || || || ||
Sbjct 32850 TGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGC 32791
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| || || ||||||||||| || || |||||||| || || ||||||
Sbjct 32790 TTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTGTCCTGTATCTTT 32731
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| ||||| ||||| |||||| || | || || ||||| || || ||||| || ||
Sbjct 32730 GCTTTCACATTGTCAATAGTATCA-GAGCTCTCCACCTCCAATGTGATTGTCTTCCCAGT 32672
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||||| ||||| ||||||||
Sbjct 32671 CAGAGTCTTCACAAAGATCTGCAT 32648
Score = 149 bits (164), Expect = 1e-30
Identities = 170/227 (75%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||| | ||| ||||| | |||||| || || | |||||| || || ||||| |
Sbjct 22199 CCACCTCTAAGACGTAGAACAACGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCC 22258
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || ||||| ||||| | ||||||||| || | ||| || || | ||||||
Sbjct 22259 AAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGA 22318
Query 82704 ATTCCTTCCTTA-TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||| ||||| ||||||||||| ||||| | || ||||| | || ||
Sbjct 22319 ATACCCTCCTTTGTCTTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAAC 22378
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809
|||||||| || ||||| |||||||| ||||| |||||||| ||||
Sbjct 22379 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCA 22425
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| || ||||| | || | ||||| |||||||| ||||| || ||||
Sbjct 31962 CCACCCCTCAGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCC 31903
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || || || ||||| || || |||||||| ||||| || || ||||||||
Sbjct 31902 AGGGTCCTTCCATCCTCGAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGA 31843
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| ||||| || || || || || ||||| ||||| | ||| |||
Sbjct 31842 ATCCCTTCCTTATCCTGAATTTTGGCCTTCACGTTGTCAATAGTATCGGAACTTTCAACT 31783
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 31782 TCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 31736
Score = 134 bits (148), Expect = 3e-26
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || || || || || ||||||| || ||| ||
Sbjct 31722 CGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCA 31663
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| ||||||||||| || || || || ||||| || || ||||||||
Sbjct 31662 TCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTG 31603
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|||||||| || ||||| ||||| ||||| || || | || | || || || | ||||||
Sbjct 31602 TCTTGAATTTTAGCTTTGACATTATCAATGGTGTC-TGAGCTCTCGACCTCAAGAGTTAT 31544
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| || || ||||| || |||||
Sbjct 31543 AGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 31508
Score = 132 bits (146), Expect = 9e-26
Identities = 149/198 (75%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
||||| || | || || || ||||||| | || || ||||| || ||||| |||
Sbjct 22912 GTAGACTCGTCTTGGATGTTGTAATCAGCAACTGTTTGGCCATCTTCAAGCTGTTTCCCA 22971
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| || || || ||||||||||| || |||||||| ||||||||||| ||||||
Sbjct 22972 GCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTTT 23031
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
||||| ||| | || ||| | || || || | ||| || ||||| || || | |||
Sbjct 23032 ACATTATCAGTAGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGTGTC 23091
Query 82794 TT-TACAAATATCTGCAT 82810
|| ||||||||||||||
Sbjct 23092 TTAAACAAATATCTGCAT 23109
Score = 123 bits (136), Expect = 5e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || || || || || ||||||| | ||| ||
Sbjct 22667 CGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAACTGTTCGGCCA 22726
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||||||||| || || || || ||||| || || ||||||||
Sbjct 22727 TCTTCAAGATGATTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTG 22786
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|||| ||| || ||||| ||||| ||||| || || | || | || || || | ||||||
Sbjct 22787 TCTTCAATTTTAGCTTTGACATTATCAATGGTGTC-TGAGCTCTCGACCTCAAGAGTTAT 22845
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || |||| || || ||||| || ||||||
Sbjct 22846 AGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCATT 22882
Score = 109 bits (120), Expect = 1e-18
Identities = 157/220 (71%), Gaps = 1/220 (0%)
Strand=Plus/Plus
Query 82591 TCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTC 82650
||| | | ||||| | || | || || |||||||| ||||| || |||| || | |
Sbjct 22435 TCAGATGAAGAACAAGATGTAAGGTGGAGTCTTTCTGAATATTGTAGTCAGCCAGGGTCC 22494
Query 82651 TACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTT 82710
| || || || ||||| || || | |||||| ||||| | || |||||||| || ||||
Sbjct 22495 TTCCATCCTCAAGTTGCTTGCCGG-AAAGATCAGTCTCTTCTGGTCTGGAGGAATCCCTT 22553
Query 82711 CCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAG 82770
||||||| ||||| || || || || || ||||| ||||| | ||| ||| | |
Sbjct 22554 CCTTATCCTGAATTTTGGCCTTCACGTTGTCAATTGTATCTGAACTTTCAACTGGAAGGG 22613
Query 82771 TTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || | |||| ||||| ||||||||
Sbjct 22614 TGATGGTCTTTCCAGTAAGTATCTTGACAAAGATCTGCAT 22653
>seq30
Length=32432
Score = 159 bits (176), Expect = 7e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||||| |||||| || || || || || || || | ||| | || ||
Sbjct 657 ACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCC 598
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| ||||| || || |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 597 ATCTTCAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCTGGTGGGATTCCCTCCTT 538
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| || || ||||| ||||| |||||| | || || |||||||||||
Sbjct 537 GTCCTGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTAT 478
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || ||||| ||||| ||||| ||||||||
Sbjct 477 GGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 442
>seq29
Length=28306
Score = 141 bits (156), Expect = 2e-28
Identities = 163/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| ||||| || || ||||| || || ||||||| |||| | | ||
Sbjct 27929 ACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCTAGAGTACGGCC 27870
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || ||||| |||||||| || || || || ||||| || || ||||||||
Sbjct 27869 GTCTTCAAGCTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 27810
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT-CTACTTCCAAAGTTA 82773
|| || ||||| ||||| || || ||||| || || | || || | || || | || |
Sbjct 27809 GTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTC-TGAGCTTTCCACCTCAAGGGTGA 27751
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || | || || ||||||||||||||
Sbjct 27750 TAGTCTTTCCAGTGAGGGTTTTAACAAATATCTGCAT 27714
>seq1518
Length=20725
Score = 132 bits (146), Expect = 9e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
||||||| || || ||||||| |||| | | || ||||| || || ||||| || ||||
Sbjct 13844 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 13785
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | || || || ||||| || || |||||||| ||||||||||| ||||| ||||| |
Sbjct 13784 TCAATCGCTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 13725
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| || || | | ||| ||||| | || |||||||| || || | || || || |
Sbjct 13724 CAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACGA 13665
Query 82801 ATATCTGCATT 82811
| |||||||||
Sbjct 13664 AGATCTGCATT 13654
>seq8314
Length=67656
Score = 131 bits (144), Expect = 3e-25
Identities = 161/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || || || |||| ||| ||| ||
Sbjct 25984 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 25925
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || || || || || | || || || ||||| || || ||||||||
Sbjct 25924 ATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTT 25865
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| || || ||||| ||||| || || | ||||| ||||| || ||
Sbjct 25864 GTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCCAAGGTAAT 25805
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||| |||| ||||| ||||| ||||||||| ||
Sbjct 25804 AGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTTT 25765
>seq8951
Length=56096
Score = 125 bits (138), Expect = 1e-23
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | | |||||| | ||| ||||| ||||||||||| || || |||||||
Sbjct 33920 CCTCCCCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCC 33861
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| ||||||| ||||| | ||||||||||||||| || ||||| || ||||| ||||||
Sbjct 33860 AGGGTTCTACCATCTTCCAATTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCCGGAGGT 33801
Query 82704 ATTCCTTCCTTATCTTG 82720
|| ||||| ||||| ||
Sbjct 33800 ATGCCTTCTTTATCCTG 33784
>seq2718
Length=65933
Score = 116 bits (128), Expect = 7e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | || || ||||| || ||||| || || || ||||
Sbjct 44746 TACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 44687
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || || || || || |||||||| ||||| | || || || ||||| |
Sbjct 44686 CCAGAGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGG 44627
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || || || ||||| || || ||| |
Sbjct 44626 GGATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCA 44567
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || ||||| || || | ||||| || || ||||||||
Sbjct 44566 CCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 44518
Score = 111 bits (122), Expect = 3e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || || || || || || ||||| || || || ||||
Sbjct 44518 TACCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 44459
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || ||||| | || ||||| |||||||| | || || || ||||| |
Sbjct 44458 CTAGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGG 44399
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCT 82760
| || ||||||||||| || ||||| || || || || ||||| || || | || |||
Sbjct 44398 GAATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTC-TGAGCTTTCG 44340
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || |||||||| || || | ||||| || || ||||||||
Sbjct 44339 ACCTCAAGGGTAATCGTCTTACCCGTAAGAGTCTTCACGAAGATCTGCAT 44290
>seq5748
Length=24579
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
||||| || || || ||||| ||||||| || | | | || | | ||||||||||
Sbjct 10224 GTAGACTCCTTTTGAATATTGTAATCAGCAAGTGTATGATCATCCTTAAATTGTTTTCCA 10283
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||| | || |||||||||||||| || |||||||| || |||| ||||||||||||
Sbjct 10284 CCAAATACTAATCTTTGTTGATCTGAGGGAATTCCTTCTTTGTCTTCAATCTTTGCTTTA 10343
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
||||| | ||| || | | | || |||| ||| || ||||| || | | ||
Sbjct 10344 ACATTGTTAATGGTGTTGGAACTCTTCACATCCAGAGTAATGGTCTTTCCAATGAGAGTT 10403
Query 82794 TTTACAAATATCTGCAT 82810
|| ||||| || |||||
Sbjct 10404 TTAACAAAGATTTGCAT 10420
>seq17061
Length=27757
Score = 87.8 bits (96), Expect = 4e-12
Identities = 91/119 (76%), Gaps = 3/119 (3%)
Strand=Plus/Minus
Query 82695 TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTA 82754
||||| | || || ||||| ||||| ||||||||||| ||||| ||||| ||||| | |
Sbjct 25027 TCTGGTAGGATACCCTCCTTGTCTTGGATCTTTGCTTTCACATTATCAATGGTATCTTAA 24968
Query 82755 GGTTCTACTTCCAAAGT---TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| |||| || || ||||| || ||||| |||| ||||| ||||||||
Sbjct 24967 CTTTCTACCTCCAGGGTGTGCATTGTCTTCCCGGTCAATATCTTAACAAAGATCTGCAT 24909
>seq3191
Length=14904
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||| || || ||||| ||||| ||||| || || ||||| | | ||| ||||||
Sbjct 6285 CCTTCCTTGTCCTGTATCTTAGCTTTGACATTATCGATGGTATCGCTGGATTCAACTTCC 6226
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| |||||||| || || |||| || || || ||||||||||||
Sbjct 6225 AGCGTTATCGTTTTACCGGTCAGAGTTTTCACGAATATCTGCATT 6181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981241063275366
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |