Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq30 87.8 1e-12 seq8951 82.4 6e-11 >seq30 Length=32432 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| || || || || |||||||||||||| |||||| | || ||| | Sbjct 213 AATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTC 272 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | | || || || ||| |||||||| || | || || || Sbjct 273 CGACACCATTGACAACGTAAAGGCCAAGATTCAGGACAAAGAGGGTATCCCACCAGACCA 332 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | |||| ||| ||||| || || |||||| | || | | ||||||||| Sbjct 333 GCAAAGGTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACAA 392 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || ||||| || || ||| | || |||||| | | ||||| Sbjct 393 TATTCAGAAGGAATCAACCCTTCATCTTGTGTTGAGGCTCAGGGGAGG 440 >seq8951 Length=56096 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 || ||||||||| | || ||||| || || || |||| ||| || |||||||| ||| Sbjct 33787 GATAAAGAAGGCATACCTCCGGATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAA 33846 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| || ||| ||| ||||||||||| || |||||||| || || || | || || Sbjct 33847 GATGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTTCTG 33906 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 33907 AGGCTCAGGGGAGGA 33921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402101131353152