Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1518 86.0 5e-12 seq11273 82.4 6e-11 >seq1518 Length=20725 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 |||| ||||| ||||| || ||| || || | ||||||||||| || |||||| | Sbjct 13844 CTTTCTGAATGTTGTAATCAGCTAGAGTA-CGTCCATCTTCGAGCTGCTTTCCGGCGAAG 13786 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || | ||||| || || || || | ||| || || || ||||| ||| | | Sbjct 13785 ATCAATCGCTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTG 13726 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | |||||| | | ||||||||| || || || | || ||||| ||||||||||| Sbjct 13725 TCAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 13666 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 13665 AAGATCTGCAT 13655 >seq11273 Length=79338 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 |||||| ||||| ||||| |||||||||||||| || | | | | || ||||| || Sbjct 31939 ATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCCTCGAGTTG 31880 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || ||||| | || || | ||| || || || || | || || ||||| || || Sbjct 31879 CTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCCTGAATTTT 31820 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 | |||| | | || | ||| || | ||||||||| || || || | || || || Sbjct 31819 GGCCTTCACGTTGTCAATAGTATCGGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGT 31760 Query 27224 CAGAGTTTTCACAAAGATTTGCATA 27248 || || || |||||||| |||||| Sbjct 31759 AAGTGTCTTGACAAAGATCTGCATA 31735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424693094892528