Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4177 114 1e-20 seq13424 82.4 8e-11 >seq4177 Length=96264 Score = 114 bits (126), Expect = 1e-20 Identities = 284/421 (67%), Gaps = 10/421 (2%) Strand=Plus/Minus Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822 ||| | ||||| ||||| || || ||||| || || | | |||||||| | || Sbjct 66946 TGCAAACCTTCGTCTCTTGAAATTAACTCATTTGAGAAGGTTAATCCAGGCATTAACCCC 66887 Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882 || || ||||||||||| || | ||||||| || |||||||| || ||||| ||||| Sbjct 66886 CGTTTTTTCAACCAAAATATCGAACAGAAGCTTCCGCTGAAGAAAATCCCTTCAACACAA 66827 Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCAT 74942 ||||| || || | || | |||||| | | || | |||||| | |||||| Sbjct 66826 GCAAAAGCCACCAAACGCTCCGCGAAAGTTTCAGACCCATCGATCCAACGAAGGGCCCAT 66767 Query 74943 TCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGCTTGGAAGAGGCTTGC-CTTCT 75000 | || ||| ||| | | | ||||| || || || || |||| | |||| ||| | Sbjct 66766 TTCGC-CTTCTTTTCAACACAAGGGATTGTCTCAATTGCACGGAACA-ATTTGCTCTTTT 66709 Query 75001 CTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACT 75060 | || | |||||||| | | || | || | |||| |||| ||||| || || Sbjct 66708 CGTCAGAATCCTTGATGTACGACTCCAACAGCAAACTGTACATCTCGGAATGGATATTCT 66649 Query 75061 CGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TG 75117 | || ||| ||| || | ||||||| || ||||| |||| ||| ||||| || || Sbjct 66648 CAATG-GCGATTTGGAACCCATAGAAAGCACGAGCCTCGGCAACCTGGACATCTTTCATG 66590 Query 75118 AAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTA 75177 || | || ||| ||||| | || |||||||| |||||||| ||||| || || | Sbjct 66589 AACCTTCCA--GCGAGGTTCTCTAAAACTATGCCGTCTGAGGCGGCAAAAAAGGCAAGAA 66532 Query 75178 C 75178 | Sbjct 66531 C 66531 >seq13424 Length=12144 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || |||| ||| |||| | || |||| ||||||||||||||||||||||||||| ||| Sbjct 1702 GATTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 1643 Query 79681 AATTGAGCTACGAAAGC 79697 || |||||||||| ||| Sbjct 1642 AACTGAGCTACGAGAGC 1626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546897287721200