Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4177 154 1e-32 >seq4177 Length=96264 Score = 154 bits (170), Expect = 1e-32 Identities = 550/852 (65%), Gaps = 11/852 (1%) Strand=Plus/Minus Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331 |||| ||| || ||||||||||| || |||| ||| ||| ||||| ||||||| Sbjct 67237 ACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAGCTCCATCCAATCAAAT 67178 Query 4332 GGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACA 4391 ||||| || ||||| || ||| | | ||| | | ||||| |||||||||| Sbjct 67177 GGATTCTGAGCATTGTACATCTTGTCATAACCCAAAGCATCCAACAATCTGTCAGCTACA 67118 Query 4392 AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-ATCTCACAGGTAGCGC 4450 || ||||| || | ||||| | || | || ||||| | | | | || ||| || || Sbjct 67117 AACTCTATGTATTTACTCATCAAATCTCCATTCATTCCCACCAGAGCACA-AGGAAGAGC 67059 Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC 4510 | || ||||| |||||| || || |||| | || | | | | || Sbjct 67058 ATCACACACGAACTCCCTTTCTATCTCCACAGCATCTGCAACAATTCCCCTGACTCGCTC 66999 Query 4511 TTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACC 4570 | || | | || | ||| | | | | ||||||||||||||||| |||||||| Sbjct 66998 CTCAGTTAGCTTCGTCCTTAACAAACTGTAAAGCAAACACGCAAAATCACAGTGCAAACC 66939 Query 4571 TTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTT 4630 ||||||||| ||| | || || || || |||||||| |||||||| || | ||||| Sbjct 66938 TTCGTCTCTTGAAATTAACTCATTTGAGAAGGTTAATCCAGGCATTAACCCCCGTTTTTT 66879 Query 4631 AAGCCAAAATAT--AGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688 | ||||||||| | | | | | | | | ||||| || ||||| || ||||| Sbjct 66878 CAACCAAAATATCGAACAGAAGCTTCCGCTG--AAGAAAATCCCTTCAACACAAGCAAAA 66821 Query 4689 GCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748 || || || || | |||| | | | | | ||||| | ||||| || Sbjct 66820 GCCACCAAACGCTCCGCGAAAG---TTTCAGACCCATCGATCCAACGAAGGGCCCATTTC 66764 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAAT 4808 || || || | ||| || || ||||| | || || || ||||| || ||||| Sbjct 66763 GCCTTCTTTTCAACACAAGGGATTGTCTCAATTGCACGGAACAATTTGCTCTTTTCGTCA 66704 Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 | || | || || | || | || | || ||||| || ||||| ||||| || || Sbjct 66703 GAATCCTTGATGTACGACTCCAACAGCAAACTGTACATCTCGGAATGGATATTCTCAATG 66644 Query 4869 GCAATCTGAAATCCGTA-AAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCT 4927 || || || || || || |||||| | ||| || | || || || || || || || Sbjct 66643 GCGATTTGGAACCCATAGAAAGCA-CGAGCCTCGGCAACCTGGACATCTTTCATGAACCT 66585 Query 4928 TTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGA 4987 | | | | ||| || ||||| ||||| ||| |||||||| || | |||||||| Sbjct 66584 TCCAGCGAGGTTCTCTAAAACTATGCCGTCTGAGGCGGCAAAAAAGGCAAGAACATGAGT 66525 Query 4988 TATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATC 5047 || || | | ||| | | | || |||| |||||| | ||| | | | ||| Sbjct 66524 GATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAGTGACGAGTATCGGTGGAGAGATC 66465 Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGG 5107 |||||||| || ||||| || || || ||||| |||||||| |||||| | || Sbjct 66464 GACTTCTTCTACCGTCCAGAAAGATGCCATGGCTTTCTTGTACATCTCCCAAATCTGTGG 66405 Query 5108 ATACTGAATCGG 5119 ||||||||| || Sbjct 66404 ATACTGAATTGG 66393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426807093745802