Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4177 181 1e-40 >seq4177 Length=96264 Score = 181 bits (200), Expect = 1e-40 Identities = 582/893 (65%), Gaps = 25/893 (3%) Strand=Plus/Minus Query 23217 TTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATAT 23275 ||| ||||| |||||||| | |||| || || ||||| ||||| || | ||| || Sbjct 67253 TTTCTGATACTCCCCAACTC-TCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCA 67195 Query 23276 TTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGAT--AATTCCTT 23333 ||||| ||||||||||||| || ||| || || ||| ||| | || | | Sbjct 67194 GCTCCATCCAATCAAATGGATTCTGAGCATTGTA--CATCTTGTCATAACCCAAAGCATC 67137 Query 23334 TAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTAT 23393 || | || || |||||||| || || |||| || ||||||||| || || || | Sbjct 67136 CAACAATCTGTCAGCTACAAACTCTATGTATTTACTCATCAAATCTCCATTCATTCCCAC 67077 Query 23394 TAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAAT 23453 || |||| |||||| | | ||| |||| || ||||||||| || Sbjct 67076 CAGAGCACAAGGAAGAGCATCACACACGAACTCCCTTTCTATCTCCACAGCATCTGCAAC 67017 Query 23454 TATTTGAACAATAACT---TCTTCACT-AGGTGGATATTTTAAATACTTAAACAATAAAC 23509 ||| | | ||| || ||| | || | | || | | ||| || | |||| Sbjct 67016 AATTC---CCCTGACTCGCTCCTCAGTTAGCTTCGTCCTTAACAAACTGTAA-AGCAAAC 66961 Query 23510 ATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATC 23569 | ||||||||||| || | ||||| || || ||| || ||||| || || ||||||| Sbjct 66960 ACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATTAACTCATTTGAGAAGGTTAATC 66901 Query 23570 CTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAA 23629 | |||||||| || |||||||| | ||||||||| | | || |||| ||||||| Sbjct 66900 CAGGCATTAACCCCCGTTTTTTCAACCAAAATATCGAACAGAAGCTTCCGCTGAAGAAAA 66841 Query 23630 TACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAA 23689 | || |||||| ||||| ||||| | ||| | || ||| | | | || | Sbjct 66840 TCCCTTCAACACAAGCAAAAGCCACCAAACGCTCCGCGAAAGTT---TCAGACCCATCGA 66784 Query 23690 TCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTA 23749 |||| | ||| || |||||| || ||||| ||||| |||||||| | Sbjct 66783 TCCAACGAAGGGCCCATTTCGCCTTCTTTTCAACACAAGGGATTGTCTCAATTGC----A 66728 Query 23750 AGAGAAAAGTT----TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 | | || || ||||| ||| ||| | || || | || | || ||||| ||| Sbjct 66727 CGGAACAATTTGCTCTTTTCGTCAGAATCCTTGATGTACGACTCCAACAGCAAACTGTAC 66668 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 || || ||||| ||||| ||||| || || || |||||||| ||| | ||| || | Sbjct 66667 ATCTCGGAATGGATATTCTCAATGGCGATTTGGAACCCATAGAAAGCACGAGCCTCGGCA 66608 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | || ||||| || | || ||| ||| | || || ||| || || || || Sbjct 66607 ACCTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACTATGCCGTCTGAGGCG 66548 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAA 23985 ||||| || |||||||||| | || ||||| |||||| | | || || |||| ||| Sbjct 66547 GCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAG 66488 Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGC 24045 | | | |||| | || | ||| ||||| || || ||||| ||| ||||| ||| | Sbjct 66487 TGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAAGATGCCATGGCTTTC 66428 Query 24046 TTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATC 24098 || ||||| |||||| | || || ||||| || || ||||| ||| Sbjct 66427 TTGTACATCTCCCAAATCTGTGGATACTGAATTGGGAACATACAGAATCGATC 66375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521184272351600