Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq63531 120 4e-22 >seq63531 Length=42858 Score = 120 bits (132), Expect = 4e-22 Identities = 187/265 (71%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGC 145746 |||| ||||||||| ||||||||| ||| || | || | | |||||| ||| | Sbjct 31849 GCTCGACGTGGTTGTCGTAGACGTGGCAGTCGCCACCGGTCCAC-ACGAAGTCGCCGACC 31907 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 ||||| || || | |||| ||||| ||||||||| | ||| ||| |||||||| Sbjct 31908 TCGAGCCCGGTCTGCGCCGCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGAAC 31967 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || || || ||||||| | ||||||||||||||||| ||||||| ||| | Sbjct 31968 GGGACACCGAGGAACATGTCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGTCG 32027 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 |||| ||||||| | | |||||| || | ||| ||||| |||||| || || Sbjct 32028 TTGACGTGGAACTGGAAGAACGCGTGGCACGGGGCCAGCGCCATCTCGGGCACCTCGGCG 32087 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCC 145951 |||||| || | || || ||||| Sbjct 32088 ACGTTCCACGCCGAGACGATGAGCC 32112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589607216882560