Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq43689 131 1e-25
seq32996 129 5e-25
seq6347 120 3e-22
seq16715 118 9e-22
seq46021 109 5e-19
seq51266 107 2e-18
seq24164 100 2e-16
seq19889 100 2e-16
seq63460 96.9 3e-15
seq15487 82.4 7e-11
>seq43689
Length=21515
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| ||||||||| | || ||||| || ||||||||||| || | ||||| |
Sbjct 2420 CTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCA 2361
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| |||||||| |||||| |||| | | |||||| || || || || |||||||||
Sbjct 2360 TCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTG 2301
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
||| || || || || | || | |||||| | |||||| ||||| | ||| |
Sbjct 2300 TCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTTATG 2241
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || ||||||||||||||
Sbjct 2240 GTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 2206
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568
||||||| |||| | | |||||| |||| |||||||| || || ||||||||||| |
Sbjct 1522 TACCTCCACGTAGACGGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAG 1463
Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628
|| | ||| || ||||| | ||| ||||| ||| |||| || | |||||||| ||
Sbjct 1462 CT-AGAGTACGTCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGG 1404
Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688
|| || || ||||| || || || ||||| | |||| || || | || ||
Sbjct 1403 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATTGTATCAGAACTTTCC 1344
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | ||| | || || ||||| |||||||| ||||| ||||||||
Sbjct 1343 ACCTCTAGGGTGATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 1294
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600
|| ||||| || || |||||||| || ||| | ||||| |||||| | || |||||
Sbjct 2174 GTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGGGTGCGACCATCCTCCAATTGCTTTCC 2116
Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660
|||| |||| | | || || || || || || ||||||||||| || || ||
Sbjct 2115 AGCGAAGATCAACCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTT 2056
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | |||||| | ||| || ||||| | || | || || ||||| || ||
Sbjct 2055 GACATTATCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCGGTGAGGGT 1996
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 1995 CTTAACAAAAATCTGCAT 1978
>seq32996
Length=3898
Score = 129 bits (142), Expect = 5e-25
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| ||||||||||| || ||||||||||| | || || ||| || |
Sbjct 2021 CAAGATGGAGGGTAGACTCTTTCTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAA 2080
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| ||||| |||| || | ||||||||| ||||| ||||| ||||||||| ||
Sbjct 2081 GCTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAA 2140
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || ||| || | || | |||||| | ||||||||||| | || | || || |
Sbjct 2141 TCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTC 2200
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || ||||| ||||||||
Sbjct 2201 CGGTGAGTGTCTTAACAAAGATCTGCAT 2228
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| ||||||||||| | || || ||| || |||||||| |||
Sbjct 1804 GTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCA 1863
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || || || || || ||||||||| |||||| |||
Sbjct 1864 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTTTG 1923
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||| | |||||||||||| | || | || || ||||||||||||
Sbjct 1924 ACATTATCAATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTT 1983
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| || |||||
Sbjct 1984 TTAACAAAGATTTGCAT 2000
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||||||||| |||| || ||||| || || ||||| || || | ||| | | ||
Sbjct 876 CAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAGTCCTCCCGTC 935
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| || ||||| ||||| |||| | |||||||| || || || || |||||||||||
Sbjct 936 CTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTC 995
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||| ||| ||| || | || | ||| || | ||||| ||||| | || | ||
Sbjct 996 TTGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGT 1055
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || |||| ||| || |||||||| ||||||
Sbjct 1056 CTTCCCAGTCAAAGTCTTGACAAAAATTTGCATG 1089
Score = 102 bits (112), Expect = 7e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||||||||| || || ||||| || | ||||| |||||| ||||| || |||
Sbjct 294 GTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 353
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTT 118660
|| |||| || | ||| ||||| || || || || ||||||| |||| || ||| |||
Sbjct 354 GCAAAGATAAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTGTCCTGT-ATCTTTGCTTT 412
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | || || | |||||| ||||| | || | || || || ||||||||
Sbjct 413 CACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGTGATTGTCTTCCCAGTCAGAGT 472
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 473 CTTCACAAAGATCTGCAT 490
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| |||||||||||||| || || | |||||| || || ||||||
Sbjct 1120 GTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGCTTTCCA 1179
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | |||||| || || || || |||||||| ||| ||| ||| |||
Sbjct 1180 GCAAAGATCAATCTCTGCTGGTCTGGGGGAATACCCTCCTTATCTTGAATCTTTGCTTTG 1239
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| || | ||||| ||||| | || | || || || |||| |||
Sbjct 1240 ACGTTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCCGTCAAAGTC 1299
Query 118722 TTTACAAAAATCTGCATG 118739
|| |||||||| ||||||
Sbjct 1300 TTGACAAAAATTTGCATG 1317
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| |||||||||||||| || || | |||||| || || ||||||
Sbjct 1348 GTTGATTCTTTCTGAATGTTGTAATCCGCCAAGGTCCTTCCATCCTCAAGTTGCTTTCCA 1407
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | |||||| || ||||| || |||||||||||| || ||| ||||
Sbjct 1408 GCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTA 1467
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| || || | ||||| ||||| | || | || || || |||| ||
Sbjct 1468 ACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTC 1527
Query 118722 TTTACAAAAATCTGCATG 118739
|| ||||| || ||||||
Sbjct 1528 TTAACAAATATTTGCATG 1545
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|| || | | ||| | ||||||||| |||| || ||||| || || ||||| || ||
Sbjct 655 TATCTNCTCTTAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTG 714
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| | | ||||| || ||||| ||||| |||| | ||||||||| || || |
Sbjct 715 CAAGAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGCTCTGGGG 774
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||||||| ||| ||| ||| || | || | ||| || | ||||| |
Sbjct 775 GAATACCCTCCTTGTCTTGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAA 834
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
|||| | || | || || || |||| ||
Sbjct 835 CCTCCAATGTAATTGTCTTCCCAGTCAAAG 864
>seq6347
Length=16439
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568
|||| || | || | || |||||| |||| || || || ||||||||||||||||| |
Sbjct 12787 TACCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTG 12846
Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628
|| | ||| | |||||| |||||||| ||||| | || | | |||||| || ||
Sbjct 12847 CT-AGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGT 12905
Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688
|| ||||| ||||| ||| |||||| || || | || | |||||| | |||||
Sbjct 12906 GGGATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTCTCA 12965
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | ||| | || || || |||| || || ||||||||||||||
Sbjct 12966 ACCTCAAGGGTAATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCAT 13015
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| |||| ||| |||||||| || || |||||||| | ||| | ||||||
Sbjct 12578 CACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCCTC 12637
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| | || | ||||||||| || || || || || || ||||||
Sbjct 12638 AAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTG 12697
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | || | |||||| | || || ||||| | ||| | || ||
Sbjct 12698 GATCTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAACCTCCAGGGTGATTGTCTT 12757
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| | || || ||||||||||||||
Sbjct 12758 GCCGGTTAATGTCTTCACAAAAATCTGCAT 12787
Score = 109 bits (120), Expect = 5e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || ||||| ||||| || | ||| || |||||| || ||
Sbjct 13040 GTGGAGGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTG 13099
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|||||||| | || | | ||||| || ||||| |||||||||||||| ||||||
Sbjct 13100 CTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATTTT 13159
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
| ||||| | || | ||||| | ||| || ||||| | ||| | || || || ||
Sbjct 13160 TGCCTTAACATTGTCAATAGTGTCTGAGCTTTCAACCTCAAGGGTAATAGTCTTTCCAGT 13219
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| |||||||||
Sbjct 13220 CAAGGTTTTCACAAAGATCTGCATG 13244
>seq16715
Length=90750
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || || |||||||| | | ||| || ||| ||
Sbjct 55017 CACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGTGAGAGTACGGCCATCTTC 55076
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| |||||||| || |||| || | |||||| || ||||| ||||||||||||||
Sbjct 55077 AAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 55136
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||||| | || | |||||| | || || ||||| | ||| | ||||||
Sbjct 55137 GATCTTAGCCTTAACGTTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGATCGTTTT 55196
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || |||||||||||
Sbjct 55197 TCCAGTGAGGGTCTTGACGAAAATCTGCAT 55226
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || ||||| ||||||||| | ||| || || ||
Sbjct 66710 CACCAAGTGGAGAGTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCCGTCTTC 66769
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| || | |||||| || || |||||||| ||||||||
Sbjct 66770 AAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGGGTATGCCTTCCTTGTCCTG 66829
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || |||||| | || | |||||| | ||| || ||||| | ||| | || ||
Sbjct 66830 GATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTGATAGTCTT 66889
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| ||||||||
Sbjct 66890 TCCAGTGAGGGTTTTGACAAAGATCTGCAT 66919
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||||||||| | || || |||||
Sbjct 54359 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGACCGTCCTCA 54418
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| | | ||||||||| || || || ||||| ||||| |
Sbjct 54419 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTGTCCTGA 54478
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| |||||| | |||||| ||||| | || | || |||
Sbjct 54479 ATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCAACCTCAAGTGTAATAGTCTTG 54538
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||||| ||||| ||||||||
Sbjct 54539 CCAGTCAAGGTTTTGACAAAGATCTGCAT 54567
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| ||||| |||||||| || || ||| | ||| |||||||| || ||
Sbjct 53915 GTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGCTTCCCT 53974
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | ||||||||| || || || ||||||||||| ||| || |||
Sbjct 53975 GCAAAGATCAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTA 54034
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | |||||| |||| | || | ||||| || |||| ||
Sbjct 54035 ACGTTGTCAATAGTATCAGAGCTCTCCGCCTCCAAAGTGATGGTTTTCCCAGTCAAGGTC 54094
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 54095 TTCACAAAAATCTGCAT 54111
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||||||||||||||||||||| | || || || ||
Sbjct 66482 CACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGGCCGTCTTC 66541
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|| || || || || |||| || | ||||| || || || ||||| ||||||||
Sbjct 66542 AAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 66601
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||||| | || | |||||| | ||| || ||||||| ||| | || ||
Sbjct 66602 GATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTT 66661
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| ||||||||
Sbjct 66662 TCCAGTGAGGGTTTTGACAAAGATCTGCAT 66691
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||||||||| | || || ||| |||
Sbjct 55246 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTCCGACCATCTTCG 55305
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| ||||| |||| || | ||||||||| || || || || ||||||||
Sbjct 55306 AGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCAGGGGGAATCCCTTCCTTGTCCTGG 55365
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | || | |||||| | || || ||||| | ||| | || ||
Sbjct 55366 ATCTTGGCTTTGACATTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGATGGTCTTT 55425
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| || || ||||||||
Sbjct 55426 CCTGTGAGGGTTTTCACGAAGATCTGCAT 55454
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||||||||| | || || |||||
Sbjct 66027 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGTCCGTCCTCA 66086
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| | | ||||| || || || ||||| ||||||||
Sbjct 66087 AGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 66146
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || |||||| | || | ||||| | ||| || ||||| | ||| | || ||
Sbjct 66147 ATCTTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTT 66206
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||||| || || ||||| |||||
Sbjct 66207 CCGGTCAGAGTCTTCACGAAAATTTGCAT 66235
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| ||||| |||||||| || || ||| | ||| || ||||| || ||
Sbjct 65355 GTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCT 65414
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || || || || ||||||||||| ||| || ||
Sbjct 65415 GCAAAGATCAGCCTCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTC 65474
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| || | ||||| ||||| | || | ||||| || |||| ||
Sbjct 65475 ACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTC 65534
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 65535 TTCACAAAAATCTGCAT 65551
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || ||||||||||| | || || |||||
Sbjct 65799 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCA 65858
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| | | |||||| || || || || || || ||||| |
Sbjct 65859 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGA 65918
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| ||||| | || | |||||| | || || ||||| | ||| | || |||
Sbjct 65919 ATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAATAGTCTTG 65978
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || ||||| || |||||
Sbjct 65979 CCAGTCAAGGTCTTCACAAAGATTTGCAT 66007
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || || || || || ||||||||||| | || || |||||
Sbjct 66254 CACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTC 66313
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| || | ||||| || || || ||||| ||||||||
Sbjct 66314 AAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTG 66373
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||||| | || | |||||| | ||| || ||||| | ||| | || ||
Sbjct 66374 GATCTTAGCCTTAACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTT 66433
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||| || || ||||| |||||
Sbjct 66434 TCCTGTCAAAGTCTTCACGAAAATTTGCAT 66463
>seq46021
Length=44830
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGT--ATCCTCGAG 118591
||||| |||||||| || || |||||||| || ||| |||| ||| |||||||||
Sbjct 38781 GTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT---AGTGTTCGTCCATCCTCGAG 38725
Query 118592 CTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAAT 118651
||| || || ||| | || | ||||| || || || || ||||| ||||||||| |||
Sbjct 38724 CTGCTTACCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGAAT 38665
Query 118652 TTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCC 118711
|| ||||| | || | |||||| | ||| ||||| | ||| | || |||||
Sbjct 38664 CTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCC 38605
Query 118712 GGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || ||||| ||||||||
Sbjct 38604 CGTCAGGGTCTTCACAAAGATCTGCAT 38578
>seq51266
Length=1200
Score = 107 bits (118), Expect = 2e-18
Identities = 145/198 (73%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||||||||| | || ||||| || | | ||||| |||||| ||||| || |||
Sbjct 346 GTAGACTCTTTGCGGATATTGTAGTCTGTAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 405
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTT 118660
|| ||||||| | ||| ||||| || || || |||||||||| |||| || ||| |||
Sbjct 406 GCAAAGATGAGCCTCTGTTGATCTGGTGGAAT-CCCTCCTTGTCCTGT-ATCTTTGCTTT 463
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | || || | |||||| ||||| | || | || || || ||||||||
Sbjct 464 CACATTGTCAATAGTATCAGAGCTCTCCACCTCCATTGTGATTGTCTTCCCAGTCAGAGT 523
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 524 CTTCACAAAGATCTGCAT 541
>seq24164
Length=196930
Score = 100 bits (110), Expect = 2e-16
Identities = 141/194 (73%), Gaps = 8/194 (4%)
Strand=Plus/Minus
Query 118549 CTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607
|||| |||||||||||||| ||| | ||| || ||| |||||||| ||||| ||| ||
Sbjct 29744 CTTTCTGAATGTTGTAATCAGCT-AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 29686
Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667
|| | |||||||| || || || || || ||||||||| ||| || ||| || |
Sbjct 29685 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTG 29626
Query 118668 TCGACGGTGTCCGTGCTC---TCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 118724
|| | ||||| |||| || || |||| || | ||| || || || ||||||||
Sbjct 29625 TCAATAGTGTC---GCTCGATTCAACTTCGAGCGTGATCGTCTTCCCCGTAAGAGTTTTC 29569
Query 118725 ACAAAAATCTGCAT 118738
|| || ||||||||
Sbjct 29568 ACGAAGATCTGCAT 29555
>seq19889
Length=12972
Score = 100 bits (110), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 5/208 (2%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || ||||| ||||| ||| |||| || | || || ||| || |
Sbjct 11786 CAAGATGGAGGGTGGACTCCTTTTGGATGCTGTAGTCAGCAAGTGTTCGGCCATCTTCAA 11727
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| ||||| |||| || | ||||||||| ||||| ||||| |||||| ||
Sbjct 11726 GCTGTTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATGCC----TTGTCTTGAA 11671
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || |||| || | || | |||||| ||||||||||| | || | || || |
Sbjct 11670 TCTTAGGTTTGACATTATCAATGGTGTCACAACTCTCGACCTCAAGAGTGATGGTCTTTC 11611
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || ||||| ||||||||
Sbjct 11610 CGGTGAGCGTCTTAACAAAGATCTGCAT 11583
>seq63460
Length=19418
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCT 118593
||||| || ||||| ||||| |||||||| || ||| | || || |||||||||||
Sbjct 4933 GTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCT-AGCGTTCGGCCATCCTCGAGCT 4991
Query 118594 GTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTT 118653
| ||||| ||| | || | | |||||| || || || ||||| |||||||| ||| |
Sbjct 4992 GCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCT 5051
Query 118654 TTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713
| || || | || | |||||| | ||| ||||| | ||| | || ||||| |
Sbjct 5052 TAGCCTTCACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCG 5111
Query 118714 TCAGAGTTTTTACAAAAATCTGCAT 118738
| || || || ||||| ||||||||
Sbjct 5112 TTAGGGTCTTCACAAAGATCTGCAT 5136
>seq15487
Length=17016
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || ||||| |||||||||||||| || || | ||| || || || | ||||
Sbjct 16620 GTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCA 16679
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | |||||| | ||||| || |||||||||||| || ||| ||||
Sbjct 16680 GCAAAGATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTA 16739
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | | || || || | ||||| ||||| | || | || || || |||| ||
Sbjct 16740 ACATTGTTGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTC 16799
Query 118722 TTTACAAAAATCTGCATG 118739
|| ||||| || ||||||
Sbjct 16800 TTGACAAATATTTGCATG 16817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433493788823488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |