Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq24164 125 8e-24 seq6347 109 6e-19 seq32996 105 8e-18 seq16715 105 8e-18 seq63460 96.9 4e-15 seq46021 96.9 4e-15 seq43689 95.1 1e-14 seq6200 91.5 2e-13 seq3825 82.4 9e-11 >seq24164 Length=196930 Score = 125 bits (138), Expect = 8e-24 Identities = 147/195 (75%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 42994 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||||||||| ||||| || | || || |||||||| || ||||| Sbjct 29745 CCTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 29686 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | |||||||||||| | || | | ||||||| | ||| | || | ||||| | Sbjct 29685 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGT-CTTGAATCTTAGCTTTGACATT 29627 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||||||||| || |||| |||||| || || ||||| || || || || Sbjct 29626 GTCAATAGTGTCGCTCGATTCAACTTCGAGCGTGATCGTCTTCCCCGTAAGAGTTTTCAC 29567 Query 43172 AAAGATTTGCATTTT 43186 ||||| |||||||| Sbjct 29566 GAAGATCTGCATTTT 29552 >seq6347 Length=16439 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| ||||| | ||||||||| | |||| ||| || || |||||||||||||| Sbjct 12560 TCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGC 12619 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||||| | || || |||||||| ||||| || || | ||||||||||| | || Sbjct 12620 AAGAGTCCTACCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGG 12679 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | || ||||| ||| ||| || | | | | ||||| ||| || Sbjct 12680 AATCCCTTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAAC 12739 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 12740 CTCCAGGGTGATTGTCTTGCCGGTTAATGTCTTCACAAAAATCTGCAT 12787 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| ||||| ||||| || | || || || ||||| ||||| || Sbjct 13052 CTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAA 13111 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | |||||||| | || | || |||||||||| ||| |||||| | | | | Sbjct 13112 AATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCC-TGAATTTTTGCCTTAACAT 13170 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| ||| || || | || || || || || || | || | Sbjct 13171 TGTCAATAGTGTCTGAGCT---TTCAACCTCAAGGGTAATAGTCTTTCCAGTCAAGGTTT 13227 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 13228 TCACAAAGATCTGCAT 13243 >seq32996 Length=3898 Score = 105 bits (116), Expect = 8e-18 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| ||||||||||||||||| | || |||||| || || || || || || Sbjct 492 CCTCCTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCA 551 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| | |||| || || || |||||||| || || | |||||||||||| | || Sbjct 552 AGAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGA 611 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107 | | |||||||| | ||| | |||| ||||| Sbjct 612 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 642 Score = 98.7 bits (108), Expect = 1e-15 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 42961 CTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAG 43020 |||| ||||||||||||||||| | || |||||| || || || || || || |||| Sbjct 866 CTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAG 925 Query 43021 TCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGC 43080 ||| | |||| || || || |||||||| || || | |||||||||||| | || | | Sbjct 926 TCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATAC 985 Query 43081 TCTCCTTGTCCATGATTTTTTG-TTTGA 43107 |||||||| | ||| | |||| ||||| Sbjct 986 CCTCCTTGT-CTTGAATCTTTGCTTTGA 1012 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 42958 CTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCA 43017 || |||||||||||||||||||||| | || |||||| || || || || || || | Sbjct 658 CTNCTCTTAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAA 717 Query 43018 GAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCA 43077 |||||| | |||| || || || |||||||| || || | |||||||| || | || | Sbjct 718 GAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGCTCTGGGGGAA 777 Query 43078 CGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107 | |||||||| | ||| | |||| ||||| Sbjct 778 TACCCTCCTTGT-CTTGAATCTTTGCTTTGA 807 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || |||||||||||||||||||| |||| | || || || ||||| || || || Sbjct 1581 CTCTTTCTGAATATTGTAATCAGCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAA 1640 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || |||| ||||||||| | || | | ||||| ||| ||| |||| | | ||| Sbjct 1641 GATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCC-TGAATTTTGGCCTTCACGT 1699 Query 43112 CGCCACCGTGTCGCTCGA--TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | || ||| || | ||| || || | |||||||| || || || || |||||| Sbjct 1700 TGTCA-ATTGTATCTGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTT 1758 Query 43170 ACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 1759 ACAAAGATCTGCAT 1772 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||||||||| || || || | || || ||||| || ||||| || Sbjct 1809 CTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAA 1868 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || | ||||||||| | || | | ||||||| | ||| |||| | ||||| Sbjct 1869 GATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGT-CTTGAATTTTAGCTTTGACAT 1927 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | || || || || || || || || | Sbjct 1928 TATCAATGGTGTCTGAGCTC---TCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTT 1984 Query 43168 TTACAAAGATTTGCATT 43184 | ||||||||||||||| Sbjct 1985 TAACAAAGATTTGCATT 2001 >seq16715 Length=90750 Score = 105 bits (116), Expect = 8e-18 Identities = 168/237 (71%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| |||||||||||||| || ||||| || | Sbjct 66704 ACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCC 66763 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || || | ||||||||| | || | || ||||| Sbjct 66764 GTCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGGGTATGCCTTCCTT 66823 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| || | || | || | ||| | | | ||||| ||| |||||| || | | Sbjct 66824 GTCC-TGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCT---TTCCACCTCAAGGG 66879 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTACGCCGAATACAA 43200 |||| || || || || || || || |||||||| ||||| | ||| | ||| ||| Sbjct 66880 TGATAGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCATCTGTACACAAAATTCAA 66936 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||| || ||||| |||| || |||||||| || || || Sbjct 66044 CTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGTCCGTCCTCAAGCTGCTTTCCGGCAAA 66103 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || |||||||| | || | || ||||||||| || | || | || | ||| Sbjct 66104 GATCAATCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC-TGGATCTTGGCTTTAACGT 66162 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || | |||||||| || || || || ||||| | Sbjct 66163 TGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCA 66222 Query 43171 CAAAGATTTGCATT 43184 | || ||||||||| Sbjct 66223 CGAAAATTTGCATT 66236 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| ||| |||||||| ||||||||||| || ||||| | Sbjct 66476 ACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGGCC 66535 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || || || || || | |||||||| | || | || ||||| Sbjct 66536 GTCTTCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTT 66595 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || || | | | | ||||| ||| |||||| |||| || Sbjct 66596 GTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCT---TTCCACCTCGAGGGT 66652 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || || || || || || |||||||| ||||| Sbjct 66653 GATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCAT 66691 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | | |||||| | ||| | || ||||| |||||||||||||| ||| Sbjct 54113 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCC 54172 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || | |||||||||||| || || | | |||||||| | || Sbjct 54173 AGTGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGAGGG 54232 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||| |||||| ||| | || | | | | | | | | ||||| ||| ||| Sbjct 54233 ATGCCCTCTTTGTCC-TGAATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCT---TTC 54288 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| || || || ||||| || | || || |||||||||||||| Sbjct 54289 CACCTCGAGGGTAATAGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 54339 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| || ||||||||||||| ||||| || | Sbjct 55011 ACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGTGAGAGTACGGCC 55070 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || || || || || || || |||| ||||||||| | || | || |||||| Sbjct 55071 ATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCCTT 55130 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| || | || | | | ||| | | | ||||| |||||| || | |||| Sbjct 55131 GTCC-TGGATCTTAGCCTTAACGTTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGA 55189 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || || || ||||| || || || ||||| Sbjct 55190 TCGTTTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 55226 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||| |||||| || || ||||||||||| || ||||| | || || Sbjct 55246 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTCCGACCATCTTCG 55305 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| || ||||| || || |||| |||||| || | || | | ||||||||| | Sbjct 55306 AGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCAGGGGGAATCCCTTCCTTGTCCTGG 55365 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || ||||| | | | ||||| |||||| || | |||||||| || Sbjct 55366 ATCTTGGCTTTGACATTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGATGGTCTTT 55425 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || || ||||| ||||| Sbjct 55426 CCTGTGAGGGTTTTCACGAAGATCTGCAT 55454 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || |||||| || || ||||||||||| || ||||| | Sbjct 65792 ACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCC 65851 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || | | ||||||||| | || | | || || Sbjct 65852 GTCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTT 65911 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| |||| | | | | | | | | ||||| |||||| || | || | Sbjct 65912 GTCC-TGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAA 65970 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || | ||||| |||||||||||||| Sbjct 65971 TAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 66007 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | ||| |||||| || |||||||||||||| ||||| || | Sbjct 54808 ACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCGAGAGTACGGCC 54867 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || || || || || || || |||| ||||||||| | || | || |||||| Sbjct 54868 ATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCCTT 54927 Query 43088 GTCCATGATTTT 43099 |||| ||| || Sbjct 54928 GTCCTGGATCTT 54939 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| || ||||||||| || ||||| ||||||| ||||| | || || |||||| Sbjct 53909 TGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGC 53968 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || || || || || | |||||| || | || | | |||||||||| ||| | || Sbjct 53969 TTCCCTGCAAAGATCAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCC-TGAATCTT 54027 Query 43101 TGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 | | | ||| | || || || |||| ||| | || | ||||||||||| || Sbjct 54028 GGCCTTAACGTTGTCAATAGTATCAGAGCTC---TCCGCCTCCAAAGTGATGGTTTTCCC 54084 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || ||||| Sbjct 54085 AGTCAAGGTCTTCACAAAAATCTGCAT 54111 >seq63460 Length=19418 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||| || || || | || || |||||||| || ||||| Sbjct 4945 CTCCTTTTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTTCCTGCGAA 5004 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || ||||||||| ||| | || | | | | Sbjct 5005 AATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC-TGAATCTTAGCCTTCACAT 5063 Query 43112 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | || | |||| || || || || | || || || ||||||||||| ||||| | Sbjct 5064 TGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCA 5123 Query 43171 CAAAGATTTGCATTTTT 43187 ||||||| ||||||||| Sbjct 5124 CAAAGATCTGCATTTTT 5140 >seq46021 Length=44830 Score = 96.9 bits (106), Expect = 4e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || | || || ||||||||||| ||||| Sbjct 38769 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCGGCGAA 38710 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||| ||||| | || | || ||||||| | ||| | || | | | | | Sbjct 38709 AATCAATCGCTGTTGGTCTGGTGGAATGCCTTCCTTGT-CTTGAATCTTAGCCTTAACAT 38651 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | || || || |||||||| || ||||| | Sbjct 38650 TGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCA 38591 Query 43171 CAAAGATTTGCATTTTT 43187 ||||||| ||||||||| Sbjct 38590 CAAAGATCTGCATTTTT 38574 >seq43689 Length=21515 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || |||||||| ||||| || || || | || || |||||| Sbjct 2636 TGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGTCCATCTTCAAGCTGC 2577 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 |||||||| || || || | ||||||||| | || | | ||| |||||| ||| | || Sbjct 2576 TTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCC-TGAATCTT 2518 Query 43101 TG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 43156 | ||| | | | | ||||| ||| ||||| || | |||||||| || || Sbjct 2517 AGCTTTCACATTGTCGATGGTGTCAGAACTC---TCCACCTCCAAGGTGATGGTCTTACC 2461 Query 43157 CGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| ||||| |||||||| |||||| Sbjct 2460 GGTTAAGGTCTTCACAAAGATCTGCATT 2433 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | | || |||||| || | ||| |||||| ||||| ||||| || || Sbjct 2433 TCCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGC 2374 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || ||||| ||||||||||| || | | ||||||||| | || Sbjct 2373 AAGGGTGCGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 2314 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| || |||| | | | ||||| |||| || Sbjct 2313 AATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTC---TC 2257 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || ||||| || || || || ||||| ||||| || ||||| Sbjct 2256 AACCTCAAGGGTTATGGTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 2206 >seq6200 Length=22545 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || ||||| || | || || |||||||| || ||||| Sbjct 22103 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAA 22162 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | || | | ||||||||| ||| || ||||| | Sbjct 22163 AATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 22222 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | ||||| || || |||||||| || || || Sbjct 22223 ATCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22282 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 22283 GAAGATCTGCATCTT 22297 >seq3825 Length=49268 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| | || | || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 15442 AAAAATTGACGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 15501 Query 60117 TCACCACTATACTAC 60131 | ||||||||||||| Sbjct 15502 TTACCACTATACTAC 15516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571362547553920