Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_003387.1
Length=52797
Score E
Sequences producing significant alignments: (Bits) Value
seq63378 167 8e-37
>seq63378
Length=15302
Score = 167 bits (184), Expect = 8e-37
Identities = 220/305 (72%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 10706 GCGGTGGCCGCCGGTATCAAGCCGGGCGAGCAACTGACCAAGTACCTGTCGCTGACCGCT 10765
|| || ||||||||||||||||| ||| || || || |||||||| ||| |||||
Sbjct 11736 GCCGTCGCCGCCGGTATCAAGCCCGGCCAGGCGCTCACGAAGTACCTCAAGCTCACCGCC 11795
Query 10766 GACACGGCCGCGATCGCCGGTACGAGCCTCGACGAAATGGGCTCGATCTTCAACAAGGTG 10825
||| ||||| | ||||| ||| |||||||| |||||||||||| |||||||| |
Sbjct 11796 GACGCGGCCACCATCGCTGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAAGACG 11855
Query 10826 CAGGGCTCGGGCAAGGCGATGACGTTGGAGCTTCGCCAGCTCGCCGACCGCGGTCTGCCG 10885
| ||||||| ||| | || ||||||||| ||||| || | |||
Sbjct 11856 ACCACCAGCGGCAAGGTCTACACGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCG 11915
Query 10886 ATCTTCCAATGGCTGCAGGACGAGTTTCACGTCAGCGGCGACGCGCTGCAGGACATGGTC 10945
|||||||| ||||||||| | |||| |||| || |||| ||| | ||||||
Sbjct 11916 ATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTC 11975
Query 10946 GCGCAGGGCGCGGTCGACTCTGAGACTTTCCGCCGGGTGATCGAGAAGAATATCGGCGGC 11005
|||||||| ||||||||| | || |||||| ||| |||||| |||| |||||||||
Sbjct 11976 TCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAAGGTCATCGAGGAGAACATCGGCGGC 12035
Query 11006 GCCGC 11010
|| ||
Sbjct 12036 GCGGC 12040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 168701163738912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |