Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_003387.1 Length=52797 Score E Sequences producing significant alignments: (Bits) Value seq63378 167 8e-37 >seq63378 Length=15302 Score = 167 bits (184), Expect = 8e-37 Identities = 220/305 (72%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 10706 GCGGTGGCCGCCGGTATCAAGCCGGGCGAGCAACTGACCAAGTACCTGTCGCTGACCGCT 10765 || || ||||||||||||||||| ||| || || || |||||||| ||| ||||| Sbjct 11736 GCCGTCGCCGCCGGTATCAAGCCCGGCCAGGCGCTCACGAAGTACCTCAAGCTCACCGCC 11795 Query 10766 GACACGGCCGCGATCGCCGGTACGAGCCTCGACGAAATGGGCTCGATCTTCAACAAGGTG 10825 ||| ||||| | ||||| ||| |||||||| |||||||||||| |||||||| | Sbjct 11796 GACGCGGCCACCATCGCTGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAAGACG 11855 Query 10826 CAGGGCTCGGGCAAGGCGATGACGTTGGAGCTTCGCCAGCTCGCCGACCGCGGTCTGCCG 10885 | ||||||| ||| | || ||||||||| ||||| || | ||| Sbjct 11856 ACCACCAGCGGCAAGGTCTACACGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCG 11915 Query 10886 ATCTTCCAATGGCTGCAGGACGAGTTTCACGTCAGCGGCGACGCGCTGCAGGACATGGTC 10945 |||||||| ||||||||| | |||| |||| || |||| ||| | |||||| Sbjct 11916 ATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTC 11975 Query 10946 GCGCAGGGCGCGGTCGACTCTGAGACTTTCCGCCGGGTGATCGAGAAGAATATCGGCGGC 11005 |||||||| ||||||||| | || |||||| ||| |||||| |||| ||||||||| Sbjct 11976 TCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAAGGTCATCGAGGAGAACATCGGCGGC 12035 Query 11006 GCCGC 11010 || || Sbjct 12036 GCGGC 12040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168701163738912