Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_004686.1
Length=56276
Score E
Sequences producing significant alignments: (Bits) Value
seq63378 80.6 1e-10
>seq63378
Length=15302
Score = 80.6 bits (88), Expect = 1e-10
Identities = 139/200 (70%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 9863 CGCGGACGCCGCGGCGATCGCTCAAACGTCGCTCGACGATATGGGGTCGATCTTCAACAA 9922
||| ||||| || | |||||| ||||||||||| ||||| |||||| |||||||
Sbjct 11792 CGCCGACGCGGCCACCATCGCTGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAA 11851
Query 9923 G--GTCCAAACCAACGGTAAAGCGATGACTGACGATCTGCAGATGCTCGCCGATCGTGGG 9980
| | ||| ||| ||| || | || ||| | || | |||||| || || ||
Sbjct 11852 GACGACCA--CCAGCGGCAAGGTCTACACGGACAACCTCAACCAGCTCGCTGACCGGGGC 11909
Query 9981 TTGCCGATCTTCACGTGGCTGCAGAAGCAGTACGGGGTGACCGGTGAGGCGCTGCAGAAG 10040
| ||||||||| ||||||||||||| ||||||| || ||| || ||| | |
Sbjct 11910 ATCCCGATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCG 11969
Query 10041 ATGGTTTCTGACGGCAAGGT 10060
||||| || | ||||||||
Sbjct 11970 ATGGTCTCGCAGGGCAAGGT 11989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179825547230784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |