Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_007967.1 Length=38194 Score E Sequences producing significant alignments: (Bits) Value seq63249 136 1e-27 >seq63249 Length=12027 Score = 136 bits (150), Expect = 1e-27 Identities = 163/218 (75%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 10067 GCGCCTTCGACACCGAGACCACCGGCGTCGACGTCGAGTCCGACCGCATCGTCACCGCCG 10126 ||| ||||||| ||||||||||||||||||||||||| ||| ||| |||||||| || Sbjct 4155 GCGTCTTCGACCTCGAGACCACCGGCGTCGACGTCGAGACCGCCCGGATCGTCACGGCGC 4214 Query 10127 CCGTGCTCCTGGTCGGCGG---CGGCCAGCCCACCGAGACGCACACCTGGCTCGCCGACC 10183 ||| |||| ||| | ||| | ||| || | | |||||||| |||| Sbjct 4215 ACGTCGGCCTGATCGACATGACCGGTCGCTCCATCGTCGAGGGTGCATGGCTCGCAGACC 4274 Query 10184 CCGGGATCGACATCCCCGAGGCCGCGAGCGCGGTGCACGGCGTCACCAGCGAACGCGCCC 10243 |||| | || |||||||||| |||| |||||||||||| |||||| ||| || |||| Sbjct 4275 CCGGCGTGGAGATCCCCGAGGGCGCGGCAGCGGTGCACGGCATCACCACCGAGCGTGCCC 4334 Query 10244 GCGCCGAGGGACGCCCCG-CGCCGATGGTGGTGTCCGA 10280 | ||||| || ||||||| || ||| ||| ||| |||| Sbjct 4335 GGGCCGATGGGCGCCCCGCCGGCGA-GGTCGTGGCCGA 4371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122006891783808