Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_007967.1
Length=38194
Score E
Sequences producing significant alignments: (Bits) Value
seq63249 136 1e-27
>seq63249
Length=12027
Score = 136 bits (150), Expect = 1e-27
Identities = 163/218 (75%), Gaps = 5/218 (2%)
Strand=Plus/Plus
Query 10067 GCGCCTTCGACACCGAGACCACCGGCGTCGACGTCGAGTCCGACCGCATCGTCACCGCCG 10126
||| ||||||| ||||||||||||||||||||||||| ||| ||| |||||||| ||
Sbjct 4155 GCGTCTTCGACCTCGAGACCACCGGCGTCGACGTCGAGACCGCCCGGATCGTCACGGCGC 4214
Query 10127 CCGTGCTCCTGGTCGGCGG---CGGCCAGCCCACCGAGACGCACACCTGGCTCGCCGACC 10183
||| |||| ||| | ||| | ||| || | | |||||||| ||||
Sbjct 4215 ACGTCGGCCTGATCGACATGACCGGTCGCTCCATCGTCGAGGGTGCATGGCTCGCAGACC 4274
Query 10184 CCGGGATCGACATCCCCGAGGCCGCGAGCGCGGTGCACGGCGTCACCAGCGAACGCGCCC 10243
|||| | || |||||||||| |||| |||||||||||| |||||| ||| || ||||
Sbjct 4275 CCGGCGTGGAGATCCCCGAGGGCGCGGCAGCGGTGCACGGCATCACCACCGAGCGTGCCC 4334
Query 10244 GCGCCGAGGGACGCCCCG-CGCCGATGGTGGTGTCCGA 10280
| ||||| || ||||||| || ||| ||| ||| ||||
Sbjct 4335 GGGCCGATGGGCGCCCCGCCGGCGA-GGTCGTGGCCGA 4371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122006891783808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |