Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq24164 147 5e-30 seq43689 141 2e-28 seq32996 141 2e-28 seq6200 127 5e-24 seq51266 123 6e-23 seq16715 120 7e-22 seq6347 113 1e-19 seq63460 107 5e-18 seq11892 105 2e-17 seq3506 96.9 8e-15 seq54467 93.3 1e-13 seq31566 93.3 1e-13 seq10226 84.2 5e-11 >seq24164 Length=196930 Score = 147 bits (162), Expect = 5e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| || || || || || || || || ||||| ||||| | || ||||| ||||||| Sbjct 29744 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 29685 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 ||| ||||| || ||| || ||||| || || || || || ||||| || || | Sbjct 29684 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 29625 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | |||| ||||||||||| ||||||||||||||||||||||| || ||||| || |||| Sbjct 29624 CAATAGTGTCGCTCGATTCAACTTCGAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACGA 29565 Query 288464 ATATCTGCATTATG 288477 | ||||||||| || Sbjct 29564 AGATCTGCATTTTG 29551 >seq43689 Length=21515 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | || || || ||||| || ||||| || Sbjct 1976 CCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 1917 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || ||||| ||||| |||||||||| | ||| || |||||| Sbjct 1916 AGGGTGCGGCCGTCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGG---TCTGGG 1860 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| ||||||||||| || || |||||||| || || | ||| ||| Sbjct 1859 GGGATTCCTTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCC 1800 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 1799 ACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 1750 Score = 120 bits (132), Expect = 7e-22 Identities = 168/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||| | || || || ||||| || ||||| || Sbjct 1748 CCACCACGGAGACGGAGCACCAAATGTAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 1689 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| || ||||||||||| ||||||| | ||| || |||||| Sbjct 1688 AGGGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAGATCAACCTCTGCTGG---TCTGGG 1632 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| ||||||||||| || || || ||||| || || | || ||| | Sbjct 1631 GGAATGCCTTCCTTATCCTGGATCTTAGCCTTAACGTTGTCAATGGTGTCTGAGCT---T 1575 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| || || || ||||| ||||| |||||||| Sbjct 1574 TCGACCTCAAGGGTAATCGTCTTACCCGTAAGTGTCTTAACGAAGATCTGCAT 1522 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || || || || |||||||| || || || ||||| |||||| Sbjct 1484 TCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCCTCCAACTGCTTTCCGGCGAAG 1425 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || ||| || ||| |||||||| ||||||||||| || || || ||| Sbjct 1424 ATAAGCCTTTGCTGA---TCCGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTAACG 1368 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || || ||||| ||||| ||||| ||||| || Sbjct 1367 TTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTCTTTCCGGTGAGAGTTTTC 1308 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 1307 ACAAAGATCTGCAT 1294 Score = 111 bits (122), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | ||| || || |||||||| ||||| || Sbjct 2660 CCACCGCGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCA 2601 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| ||||| | || || || || |||||||| | ||| || |||| Sbjct 2600 AGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 2541 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| ||||| || || |||||||| || || || | || ||| || Sbjct 2540 ATCCCCTCTTTGTCCTGAATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTC---TCC 2484 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | ||||| ||||| ||||| | ||||| || || ||||||||| Sbjct 2483 ACCTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTCACAAAGATCTGCATT 2433 >seq32996 Length=3898 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || ||||||| || ||||| |||||||| ||||| || Sbjct 264 CCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCA 323 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || | ||||||| |||| Sbjct 324 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGGG 383 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || |||||||| || || |||| ||| |||| || Sbjct 384 ATCCCTTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTC---TCC 440 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| |||||||| ||||||||||| || || |||||||| Sbjct 441 ACCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 490 Score = 104 bits (114), Expect = 6e-17 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| ||| || |||||||| || || || || Sbjct 1774 CCACCACGAAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 1833 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || |||||||| | ||| || |||||| Sbjct 1834 AGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGG---TCTGGG 1890 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| || || || ||||| ||||| || || || || | || |||| Sbjct 1891 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTC--- 1947 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || ||||| ||||||||||| || || || || |||||| Sbjct 1948 TCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCATT 2001 >seq6200 Length=22545 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | || || || ||||| || |||||||| Sbjct 22068 CCACCACGGAGACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCA 22127 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| ||||| |||| |||||| || |||||| Sbjct 22128 AGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGG---TCTGGG 22184 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| || ||||| || || || || | ||| || || Sbjct 22185 GGAATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCGATGGTGTCGGAAGACTCA 22244 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || || || ||||| |||||||| Sbjct 22245 ACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 22294 >seq51266 Length=1200 Score = 123 bits (136), Expect = 6e-23 Identities = 169/233 (73%), Gaps = 11/233 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || ||||||| || ||||| ||||||| ||||| | Sbjct 315 TCCACCACGGAGCTTGAGGACAAGATGAAGAGTAGACTCTTTGCGGATATTGTAGTCTGT 374 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | || || || || ||||| || | ||||||| ||||| Sbjct 375 AAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGA---TCTGG 431 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||| || || ||||| || || |||||||| || || |||| ||| |||| Sbjct 432 TGGAATCCCTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTC--- 488 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| ||||||||||| || || |||||||| Sbjct 489 TCCACCTCCATTGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 541 >seq16715 Length=90750 Score = 120 bits (132), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| || || || ||||| || || || || Sbjct 66009 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 66068 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || ||||| || ||||||| | || || |||||| Sbjct 66069 AGGGTCCGTCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGG---TCTGGG 66125 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| || ||||| ||||| || |||| ||| ||| Sbjct 66126 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCA 66185 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| ||||| |||||||||||||| ||||| || |||||| Sbjct 66186 ACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAAATTTGCATT 66236 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || |||||||| || || | | Sbjct 55000 CCACCGCGGAGACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGTG 55059 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || ||||| | ||||||||| || |||||||| | ||| || ||| Sbjct 55060 AGAGTACGGCCATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTG---GTCTGGA 55116 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| || || || ||||| || || | || ||| Sbjct 55117 GGGATGCCCTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCAATGGTGTCTGAACTTTCC 55176 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| || || || || ||||||||||| |||||||| Sbjct 55177 ACCTCAAGGGTGATCGTTTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 55226 Score = 84.2 bits (92), Expect = 5e-11 Identities = 113/155 (73%), Gaps = 7/155 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || |||||||| || || ||| Sbjct 54797 CCACCGCGGAGACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCG 54856 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || ||||| | ||||||||| || |||||||| | ||| || ||| Sbjct 54857 AGAGTACGGCCATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTG---GTCTGGA 54913 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGC-TTTCA 288397 ||||| || || || |||||||| || || ||||| Sbjct 54914 GGGATGCCCTCCTTGTCCTGGATCTTAGCNTTTCA 54948 >seq6347 Length=16439 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| || |||||| || || |||||||| || Sbjct 12333 CCACCACGGAGACGAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGCA 12392 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || || |||| | ||| || |||||| Sbjct 12393 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGG---TCTGGG 12449 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || |||||||| || ||||| ||||| || || || | ||| |||| Sbjct 12450 GGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTATCAATGGTATCTGAGCTC--- 12506 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || | || |||||||| || |||| |||||||| |||||||||||| Sbjct 12507 TCCACCTCCAAGGTAATCGTCTTTCCAGTCAATGTCTTGACAAATATCTGCATT 12560 Score = 104 bits (114), Expect = 6e-17 Identities = 168/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || || || | ||| || ||||| || || |||| Sbjct 13241 CATG-CCACCACGCAGACGAAGGACAAGGTGGAGTGTGGACTCCTTTTGTATGTTGTAGT 13299 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||| || || || ||||| || || ||||||| | ||| ||| | Sbjct 13300 CAGCTAGAGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAATCTCTGCTGA---T 13356 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| |||||||| || || |||||||| || || || || || |||| || || Sbjct 13357 CTGGAGGAATTCCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGC 13416 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || ||||||||||||| || || || || |||||||| Sbjct 13417 TC---TCAACCTCAAGAGTAATTGTCTTCCCGGTCAAGGTTTTCACAAAGATCTGCAT 13471 >seq63460 Length=19418 Score = 107 bits (118), Expect = 5e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || || | ||| || |||||||| || ||||| || Sbjct 4909 TCCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 4968 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||||| || || || || | || ||||||||||| |||| | ||| || ||| Sbjct 4969 TAGCGTTCGGCCATCCTCGAGCTGCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGTGG 5028 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || ||||| || || || ||||| || || || | || || ||||| Sbjct 5029 AATGCCTTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTGTCTGATGACTCTAC 5088 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || || ||||| || || || ||||| || || ||||||||| Sbjct 5089 CTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATT 5137 >seq11892 Length=31596 Score = 105 bits (116), Expect = 2e-17 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| || || ||||| || || || || | |||||| ||||| ||| Sbjct 24172 ATACCTTCCTTGTCCTGTATCTTGGCTTTAACATTGTCGATGGTATCGCTGGATTCAACT 24231 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| ||||| || ||||||||||| || ||||||||||||||| Sbjct 24232 TCCAGCGTAATCGTTTTACCGGTCAGAGTTTTCACGAATATCTGCATT 24279 >seq3506 Length=94386 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288248 CACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGA 288307 |||| | || || || || ||||| | || || ||| ||||| || ||||| || | Sbjct 52618 CACCATGAAGCCTTAGCACTAGATGTAGAGTTGATTTTTTCTGGATGTTGTAGTCCGCCA 52559 Query 288308 GCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG-- 288365 ||| | || || || | || || || || || ||||| | || || ||||| Sbjct 52558 AGGTGTGGCCATCCTCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGG---TCTGGAA 52502 Query 288366 -GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 |||||||||||| || || || || || || | || || |||| || ||| |||| | Sbjct 52501 GGATTCCTTCTTTGTCTTGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAATTCGA 52442 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 |||| || || || || | | ||||||||| || ||||||||||||||| Sbjct 52441 CTTCCAGAGTAATGGTTTAACTGGTCAGAGTTTTCACGAATATCTGCATT 52392 >seq54467 Length=1408 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || || || || | || || || | ||||| || || || Sbjct 1176 TCTTTCTGGATGTTGTAATCAGCAAGAGTCCTACCATCCTCAAGCTGTTTGCCAGCAAAA 1117 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | ||| ||||| ||||| ||||||||||| || || || || || ||||| || Sbjct 1116 ATTAAACGTTGTTGGTGCTCTGGAATTCCTTCTTTGTCTTGAATCTTTGCCTTCACATTA 1057 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | ||| |||||| | || ||||| ||||||||||||| |||| || Sbjct 1056 TCAGTGGCATCTTAACTTTCTACCGCTAGGGTGATTGTCTTCCCGGTCAATATCTTAACA 997 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 996 AAGATCTGCAT 986 >seq31566 Length=6582 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || || || || | || || || | ||||| || || || Sbjct 415 TCTTTCTGGATGTTGTAATCAGCAAGAGTCCTACCATCCTCAAGCTGTTTGCCAGCAAAA 474 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | ||| ||||| ||||| ||||||||||| || || || || || ||||| || Sbjct 475 ATTAAACGTTGTTGGTGCTCTGGAATTCCTTCTTTGTCTTGAATCTTTGCCTTCACATTA 534 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | ||| |||||| | || ||||| ||||||||||||| |||| || Sbjct 535 TCAGTGGCATCTTAACTTTCTACCGCTAGGGTGATTGTCTTCCCGGTCAATATCTTAACA 594 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 595 AAGATCTGCAT 605 >seq10226 Length=40247 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 72702 AGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGAT 72761 || || ||||| | ||| ||| || ||||||||||||||| |||||||||| ||||| Sbjct 7008 AGGGACTGGGGTTTTGCTGGGGACTATGTAGAAGCAATGTGGATGATGCTGCAGCAAGAG 6949 Query 72762 ACTCCGGATGACTATGTGATTGCAAC 72787 | ||||||||||||||| | ||||| Sbjct 6948 AAGCCGGATGACTATGTGGTAGCAAC 6923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178692161804192