Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_009993.2 Length=53746 Score E Sequences producing significant alignments: (Bits) Value seq62913 105 2e-18 seq62649 84.2 8e-12 >seq62913 Length=7390 Score = 105 bits (116), Expect = 2e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 15189 TGGGATGCCATCGCGCAGGCCGAATCCGGCGGCAACTGGGCGATCAACACCGGCAACGGG 15248 ||||| ||| |||||||| ||| ||||||||||||||||| ||||||||||||||||| Sbjct 7245 TGGGACGCCCTCGCGCAGTGCGAGTCCGGCGGCAACTGGGCCATCAACACCGGCAACGGC 7304 Query 15249 TACTACGGCGGGTTGCAGTTC 15269 ||||||||||| |||||||| Sbjct 7305 TACTACGGCGGTCTGCAGTTC 7325 >seq62649 Length=5867 Score = 84.2 bits (92), Expect = 8e-12 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 25134 TGACTGGGGGTCAAGGGGTCGCAGGTTCAAATCCTGTCAGCCCGAC 25179 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1926 TGACTGGGGGTCAAGGGGTCGCAGGTTCAAATCCTGTCAGCCCGAC 1971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171735667887744