Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq24164 129 6e-25
seq6347 113 5e-20
seq32996 105 7e-18
seq16715 102 9e-17
seq63460 98.7 1e-15
seq46021 98.7 1e-15
seq43689 98.7 1e-15
seq6200 93.3 5e-14
>seq24164
Length=196930
Score = 129 bits (142), Expect = 6e-25
Identities = 148/195 (76%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 42019 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| ||||| ||||||||||| ||||| || | || || |||||||| || |||||
Sbjct 29745 CCTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 29686
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | |||||||||||| | ||| | | ||||||| | ||| | || | ||||| |
Sbjct 29685 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGT-CTTGAATCTTAGCTTTGACATT 29627
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||||||||||| || |||| |||||| || || ||||| || || || ||
Sbjct 29626 GTCAATAGTGTCGCTCGATTCAACTTCGAGCGTGATCGTCTTCCCCGTAAGAGTTTTCAC 29567
Query 42197 AAAGATTTGCATTTT 42211
||||| ||||||||
Sbjct 29566 GAAGATCTGCATTTT 29552
>seq6347
Length=16439
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| ||||| | ||||||||| | |||| ||| || || ||||||||||||||
Sbjct 12561 CCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCA 12620
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| | || || |||||||| ||||| || || | ||||||||||| | |||
Sbjct 12621 AGAGTCCTACCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGA 12680
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | || ||||| ||| ||| || | | | | ||||| ||| ||
Sbjct 12681 ATCCCTTCTTTGTCTTGGATCTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAACC 12740
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| || ||||| |||| ||||| ||||| || |||||
Sbjct 12741 TCCAGGGTGATTGTCTTGCCGGTTAATGTCTTCACAAAAATCTGCAT 12787
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || |||| |||| ||||||||| | || ||||||||||| |||||||| ||
Sbjct 12788 ACCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTGC 12847
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||||| | || || ||||| || ||||| || || | | ||||||||| | |||
Sbjct 12848 TAGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 12907
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156
| || ||||| | | ||| |||| | |||| | | | ||||| ||| |
Sbjct 12908 GATGCCTTCCTTAT-CTTGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTC---T 12963
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || | || ||||| || || || | ||||| ||||| || |||||
Sbjct 12964 CAACCTCAAGGGTAATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCAT 13015
Score = 82.4 bits (90), Expect = 8e-11
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||||||||| ||||| ||||| || | || || || ||||| ||||| ||
Sbjct 13052 CTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAA 13111
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | | |||||||| | || | || |||||||||| ||| |||||| | | | |
Sbjct 13112 AATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCC-TGAATTTTTGCCTTAACAT 13170
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| ||| ||| || || | || || || || || || | || |
Sbjct 13171 TGTCAATAGTGTCTGAGCT---TTCAACCTCAAGGGTAATAGTCTTTCCAGTCAAGGTTT 13227
Query 42193 TTACAAAGATTTGCAT 42208
| |||||||| |||||
Sbjct 13228 TCACAAAGATCTGCAT 13243
>seq32996
Length=3898
Score = 105 bits (116), Expect = 7e-18
Identities = 116/152 (76%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|||||||| ||||||||||||||||| | || |||||| || || || || || ||
Sbjct 492 CCTCCTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCA 551
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| | |||| || || || |||||||| || || | |||||||||||| | ||
Sbjct 552 AGAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGA 611
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132
| | |||||||| | ||| | |||| |||||
Sbjct 612 ATACCCTCCTTGT-CTTGAATCTTTGCTTTGA 642
Score = 98.7 bits (108), Expect = 1e-15
Identities = 112/148 (76%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 41986 CTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAG 42045
|||| ||||||||||||||||| | || |||||| || || || || || || ||||
Sbjct 866 CTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAG 925
Query 42046 TCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGC 42105
||| | |||| || || || |||||||| || || | |||||||||||| | || | |
Sbjct 926 TCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATAC 985
Query 42106 TCTCCTTGTCCATGATTTTTTG-TTTGA 42132
|||||||| | ||| | |||| |||||
Sbjct 986 CCTCCTTGT-CTTGAATCTTTGCTTTGA 1012
Score = 95.1 bits (104), Expect = 1e-14
Identities = 113/151 (75%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 41983 CTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCA 42042
|| |||||||||||||||||||||| | || |||||| || || || || || || |
Sbjct 658 CTNCTCTTAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAA 717
Query 42043 GAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCA 42102
|||||| | |||| || || || |||||||| || || | |||||||| || | || |
Sbjct 718 GAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGCTCTGGGGGAA 777
Query 42103 CGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132
| |||||||| | ||| | |||| |||||
Sbjct 778 TACCCTCCTTGT-CTTGAATCTTTGCTTTGA 807
Score = 93.3 bits (102), Expect = 5e-14
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||| || |||||||||||||||||||| |||| | || || || ||||| || || ||
Sbjct 1581 CTCTTTCTGAATATTGTAATCAGCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAA 1640
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| |||| ||||||||| | || | | ||||| ||| ||| |||| | | |||
Sbjct 1641 GATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCC-TGAATTTTGGCCTTCACGT 1699
Query 42137 CGCCACCGTGTCGCTCGA--TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| || ||| || | ||| || || | |||||||| || || || || ||||||
Sbjct 1700 TGTCA-ATTGTATCTGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTT 1758
Query 42195 ACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 1759 ACAAAGATCTGCAT 1772
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/197 (71%), Gaps = 8/197 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||| || ||||||||||| || || || | || || ||||| || ||||| ||
Sbjct 1809 CTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAA 1868
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || | ||||||||| | || | | ||||||| | ||| |||| | |||||
Sbjct 1869 GATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGT-CTTGAATTTTAGCTTTGACAT 1927
Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| || || || | || || || || || || || || |
Sbjct 1928 TATCAATGGTGTCTGAGCTC---TCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTT 1984
Query 42193 TTACAAAGATTTGCATT 42209
| |||||||||||||||
Sbjct 1985 TAACAAAGATTTGCATT 2001
>seq16715
Length=90750
Score = 102 bits (112), Expect = 9e-17
Identities = 157/220 (71%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | || |||||| |||||||||||||| || ||||| || |
Sbjct 66704 ACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCC 66763
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || || || || || | ||||||||| | || | || |||||
Sbjct 66764 GTCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGGGTATGCCTTCCTT 66823
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168
|||| || | || | || | ||| | | | ||||| ||| |||||| || | |
Sbjct 66824 GTCC-TGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCT---TTCCACCTCAAGGG 66879
Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || || || || || || || |||||||| |||||
Sbjct 66880 TGATAGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCAT 66919
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||||||||| || ||||| |||| || |||||||| || || ||
Sbjct 66044 CTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGTCCGTCCTCAAGCTGCTTTCCGGCAAA 66103
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | || |||||||| | || | || ||||||||| || | || | || | |||
Sbjct 66104 GATCAATCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC-TGGATCTTGGCTTTAACGT 66162
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| ||| || || | |||||||| || || || || ||||| |
Sbjct 66163 TGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCA 66222
Query 42196 CAAAGATTTGCATT 42209
| || |||||||||
Sbjct 66223 CGAAAATTTGCATT 66236
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | ||| ||| |||||||| ||||||||||| || ||||| |
Sbjct 66476 ACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGGCC 66535
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || || ||||| || || || || || | |||||||| | || | || |||||
Sbjct 66536 GTCTTCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTT 66595
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169
|||| ||| || || | | | | ||||| ||| |||||| |||| ||
Sbjct 66596 GTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCT---TTCCACCTCGAGGGT 66652
Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || || || || || || |||||||| |||||
Sbjct 66653 GATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCAT 66691
Score = 93.3 bits (102), Expect = 5e-14
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| || | | |||||| | ||| | || ||||| |||||||||||||| ||
Sbjct 54112 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGC 54171
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||| |||| | || || | |||||||||||| || || | | |||||||| | ||
Sbjct 54172 CAGTGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGAGG 54231
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156
| || ||| |||||| ||| | || | | | | | | | | ||||| ||| ||
Sbjct 54232 GATGCCCTCTTTGTCC-TGAATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCT---TT 54287
Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| |||| || || || ||||| || | || || ||||||||||||||
Sbjct 54288 CCACCTCGAGGGTAATAGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCAT 54339
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | ||| |||||| || ||||||||||||| ||||| || |
Sbjct 55011 ACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGTGAGAGTACGGCC 55070
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || || || || || || || || |||| ||||||||| | || | || ||||||
Sbjct 55071 ATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCCTT 55130
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| || | || | | | ||| | | | ||||| |||||| || | ||||
Sbjct 55131 GTCC-TGGATCTTAGCCTTAACGTTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGA 55189
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| ||||| || || || ||||| || || || |||||
Sbjct 55190 TCGTTTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 55226
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||||| || | || |||||| || || ||||||||||| || ||||| |
Sbjct 65792 ACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCC 65851
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || || || || | | ||||||||| | ||| | | || ||
Sbjct 65852 GTCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTT 65911
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| |||| | | | | | | | | ||||| |||||| || | || |
Sbjct 65912 GTCC-TGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAA 65970
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || ||||| || | ||||| ||||||||||||||
Sbjct 65971 TAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 66007
Score = 89.7 bits (98), Expect = 6e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || || ||||||||||| || ||||| | || ||
Sbjct 55246 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTCCGACCATCTTCG 55305
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
||||| || ||||| || || |||| |||||| || | || | | ||||||||| |
Sbjct 55306 AGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCAGGGGGAATCCCTTCCTTGTCCTGG 55365
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || ||||| | | | ||||| |||||| || | |||||||| ||
Sbjct 55366 ATCTTGGCTTTGACATTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGATGGTCTTT 55425
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || || || ||||| |||||
Sbjct 55426 CCTGTGAGGGTTTTCACGAAGATCTGCAT 55454
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
||||| || ||||||||| || ||||| ||||||| ||||| | || || ||||||
Sbjct 53909 TGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGC 53968
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
|| || || || || || | |||||| || | ||| | | |||||||||| ||| | ||
Sbjct 53969 TTCCCTGCAAAGATCAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCC-TGAATCTT 54027
Query 42126 TGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181
| | | ||| | || || || |||| ||| | || | ||||||||||| ||
Sbjct 54028 GGCCTTAACGTTGTCAATAGTATCAGAGCTC---TCCGCCTCCAAAGTGATGGTTTTCCC 54084
Query 42182 CGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| ||||| || |||||
Sbjct 54085 AGTCAAGGTCTTCACAAAAATCTGCAT 54111
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | ||| |||||| || |||||||||||||| ||||| || |
Sbjct 54808 ACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCGAGAGTACGGCC 54867
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || || || || || || || || |||| ||||||||| | || | || ||||||
Sbjct 54868 ATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCCTT 54927
Query 42113 GTCCATGATTTT 42124
|||| ||| ||
Sbjct 54928 GTCCTGGATCTT 54939
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| || | | |||||| | ||| | || ||||| |||||||||||||| ||
Sbjct 65552 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGC 65611
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
| |||| | || || | |||||| ||||| || || | | ||||| || | |||
Sbjct 65612 TAATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGATCTGGTGG 65671
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||| |||||| ||| | |||| | | ||| | | | |||||| |||||
Sbjct 65672 GATACCCTCTTTGTCC-TGAATCTTTGCCTTAACGTTGTCAATGGTGTCGGAGCTTTCCA 65730
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | || || || ||||| || | ||||| || |||||||||||
Sbjct 65731 CCTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 65779
>seq63460
Length=19418
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||| || ||||| ||||| || || || | || || |||||||| || |||||
Sbjct 4945 CTCCTTTTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTTCCTGCGAA 5004
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | | ||||||||| | ||| | || ||||||||| ||| | || | | | |
Sbjct 5005 AATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC-TGAATCTTAGCCTTCACAT 5063
Query 42137 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| || | |||| || || || || | || || || ||||||||||| ||||| |
Sbjct 5064 TGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCA 5123
Query 42196 CAAAGATTTGCATTTT 42211
||||||| ||||||||
Sbjct 5124 CAAAGATCTGCATTTT 5139
>seq46021
Length=44830
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| ||||| || || || | || || ||||||||||| |||||
Sbjct 38769 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCGGCGAA 38710
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | |||||| ||||| | ||| | || ||||||| | ||| | || | | | | |
Sbjct 38709 AATCAATCGCTGTTGGTCTGGTGGAATGCCTTCCTTGT-CTTGAATCTTAGCCTTAACAT 38651
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| || || || || | || || || |||||||| || ||||| |
Sbjct 38650 TGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCA 38591
Query 42196 CAAAGATTTGCATTTT 42211
||||||| ||||||||
Sbjct 38590 CAAAGATCTGCATTTT 38575
>seq43689
Length=21515
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
|||| ||| |||||| || |||||||| ||||| || || || | || || ||||||
Sbjct 2636 TGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGTCCATCTTCAAGCTGC 2577
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
|||||||| || || || | ||||||||| | ||| | | ||| |||||| ||| | ||
Sbjct 2576 TTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCC-TGAATCTT 2518
Query 42126 TG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCC 42181
| ||| | | | | ||||| ||| ||||| || | |||||||| || ||
Sbjct 2517 AGCTTTCACATTGTCGATGGTGTCAGAACTC---TCCACCTCCAAGGTGATGGTCTTACC 2461
Query 42182 CGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||| ||||| |||||||| ||||||
Sbjct 2460 GGTTAAGGTCTTCACAAAGATCTGCATT 2433
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | | || |||||| || | ||| |||||| ||||| ||||| || ||
Sbjct 2432 CCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 2373
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || ||||| ||||||||||| || | | ||||||||| | ||
Sbjct 2372 AGGGTGCGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 2313
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158
| | ||||||||| ||| || |||| | | | ||||| |||| ||
Sbjct 2312 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTC---TCA 2256
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | || ||||| || || || || ||||| ||||| || |||||
Sbjct 2255 ACCTCAAGGGTTATGGTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 2206
>seq6200
Length=22545
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || ||||| || | || || |||||||| || |||||
Sbjct 22103 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAA 22162
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | ||||||||||| | || | | ||||||||| ||| || ||||| |
Sbjct 22163 AATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 22222
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| || || || || | ||||| || || |||||||| || || ||
Sbjct 22223 ATCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22282
Query 42197 AAAGATTTGCATTTTC 42212
||||| ||||| |||
Sbjct 22283 GAAGATCTGCATCTTC 22298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542780511253760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |