Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq3506 129 6e-25
seq16715 127 2e-24
seq32996 123 2e-23
seq6347 107 2e-18
seq24164 104 2e-17
seq51266 98.7 1e-15
seq43689 95.1 1e-14
seq15487 93.3 4e-14
seq25243 91.5 1e-13
seq6200 89.7 5e-13
>seq3506
Length=94386
Score = 129 bits (142), Expect = 6e-25
Identities = 164/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||||||||| | || |||| ||| || |||||||| || || | |||| | |
Sbjct 52607 CTTAGCACTAGATGTAGAGTTGATTTTTTCTGGATGTTGTAGTCCGCCAAGGTGTGGCCA 52548
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| || |||||||| || ||| |||| |||| |||||||| ||| | |||||||||||
Sbjct 52547 TCCTCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAAGGATTCCTTCTTTG 52488
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|||||||| || ||| || || | |||| | | || ||||| | ||| | |
Sbjct 52487 TCTTGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAATTCGACTTCCAGAGTAATG 52428
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGA 64454
|| | | ||||| |||||| ||||| || |||||||| | ||||
Sbjct 52427 GTTTAACTGGTCAGAGTTTTCACGAATATCTGCATTTTCACGATGA 52382
>seq16715
Length=90750
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || ||||| || || ||||||||||| || | ||| || ||||
Sbjct 66252 AGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCC 66311
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||||||| | || |||| |||||||| || ||||| ||||| || ||
Sbjct 66312 TCAAGCTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 66371
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || || | || | ||||
Sbjct 66372 TGGATCTTAGCCTTAACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTC 66431
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || |||||||| || |||||||||||||||
Sbjct 66432 TTTCCTGTCAAAGTCTTCACGAAAATTTGCATT 66464
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || ||||||||||| || | ||| || |||| |||||||||
Sbjct 65805 TGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGC 65864
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| | || | || ||||||||| || ||||| |||||||| || || |||||
Sbjct 65865 TTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTG 65924
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || ||| ||||| || | || | |||||||| |||
Sbjct 65925 GCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAATAGTCTTGCCAGTC 65984
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || || || ||||||||
Sbjct 65985 AAGGTCTTCACAAAGATTTGCAT 66007
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || |||||||||||||||||||| |||| ||| || |||||
Sbjct 66480 AGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGGCCGTCT 66539
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| |||||||||||| | || |||| |||||||| || || || ||||| || ||
Sbjct 66540 TCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCC 66599
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | ||||| || | || | |||
Sbjct 66600 TGGATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTC 66659
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || | ||||| || || || |||||
Sbjct 66660 TTTCCAGTGAGGGTTTTGACAAAGATCTGCAT 66691
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | ||| || | |||| || || || || || ||||||||||| ||
Sbjct 66009 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 66068
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || |||| ||||||||||| |||||| | || | | |||||||| || |||
Sbjct 66069 AGGGTCCGTCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGA 66128
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || | | || ||||| || || | || || | || ||
Sbjct 66129 ATGCCTTCCTTGTCCTGGA-TCTTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCAAC 66187
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | |||||| ||||||| ||| || |||||||||||||||
Sbjct 66188 CTCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAAATTTGCATT 66236
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || || | || | | |||||||||||||| ||
Sbjct 65355 GTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCT 65414
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || ||||| || || || || || || |||
Sbjct 65415 GCAAAGATCAGCCTCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTC 65474
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| ||||| || | ||| | ||| || || ||||| ||
Sbjct 65475 ACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTC 65534
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 65535 TTCACAAAAATCTGCAT 65551
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || ||||||||||| || | ||| || |||| |||||||||
Sbjct 54365 TGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGACCGTCCTCAAGCTGC 54424
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| | || | || |||||| || || || || || ||||| || || || ||
Sbjct 54425 TTTCCGGCAAAGATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTGTCCTGAATCTTG 54484
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || || | || || || | || | |||||||| |||
Sbjct 54485 GCCTTAACATTGTCGATGGTGTCGGAGCTCTCAACCTCAAGTGTAATAGTCTTGCCAGTC 54544
Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444
|| ||||| || || || ||||||
Sbjct 54545 AAGGTTTTGACAAAGATCTGCATT 54568
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/121 (77%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||| |||||||| || | || || |||||||||||||||||||
Sbjct 66723 GTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCCGTCTTCAAGCTGCTTGCCT 66782
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || ||||| || || || | | || |||||
Sbjct 66783 GCAAAGATCAGCCTCTGCTGGTCCGGGGGTATGCCTTCCTTGTCCTGGA-TCTTGGCTTT 66841
Query 64367 A 64367
|
Sbjct 66842 A 66842
Score = 82.4 bits (90), Expect = 8e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || ||||||||||| |||| ||| || | ||||| |||||
Sbjct 55252 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGGGTCCGACCATCTTCGAGCTGT 55311
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || ||| | || || | |||||| || || ||||| ||||| || || || | | ||
Sbjct 55312 TTCCCAGCAAAGATCAGTCTCTGCTGATCAGGGGGAATCCCTTCCTTGTCCTGGA-TCTT 55370
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| || | || || ||||| || | || | |||||| || ||
Sbjct 55371 GGCTTTGACATTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGTGATGGTCTTTCCTGT 55430
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
| ||||| ||||| || |||||
Sbjct 55431 GAGGGTTTTCACGAAGATCTGCAT 55454
>seq32996
Length=3898
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || || || ||||| ||||||||||| || | || || | ||
Sbjct 1788 AAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATC 1847
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||| || || ||| | || |||| ||||||||| || ||||| ||||| || ||
Sbjct 1848 TTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTC 1907
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | |||| ||||| ||| || | || || | || || || | ||||| |
Sbjct 1908 TTG-AATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAG 1966
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| ||||||| |||||| || || |||||||||
Sbjct 1967 TCTTTCCGGTCAGAGTTTTAACAAAGATTTGCATT 2001
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || ||||||| || || ||||| || || ||||| ||||| | |||||| |
Sbjct 276 CTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGGCCA 335
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| ||||||||||| || ||| | || |||| ||| || || || || || ||||| ||
Sbjct 336 TCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTG 395
Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| |||| | |||||||| ||| || | |||||| | ||||| || | || |
Sbjct 396 TCCTGTA-TCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGTGAT 454
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || |||| ||| || || || || |||||
Sbjct 455 TGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 490
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || || ||||| ||||| |||||||| || | ||| | | ||
Sbjct 1560 AAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAATCAGCCAGGGTCCTTCCATC 1619
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| |||||||||||| | || || | ||||||||| |||||||| ||||| || ||
Sbjct 1620 CTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATC 1679
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| ||||| ||| || || | |||||| || ||||| | || | |||
Sbjct 1680 CTGAATTTTGGCCTTCACGTTGTCAATTGTATCTGAACTTTCAACTTCAAGGGTGATGGT 1739
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || ||||| || || |||||
Sbjct 1740 CTTTCCAGTAAGTGTCTTTACAAAGATCTGCAT 1772
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| ||||||||||||||||| | ||| | | ||
Sbjct 1104 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATC 1163
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| ||||| || ||| | || | | ||||||||| || ||||| || || || ||
Sbjct 1164 CTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGAATACCCTCCTTATC 1223
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | |||||||| || || | ||||| || || || | ||| | |
Sbjct 1224 TTG-AATCTTTGCTTTGACGTTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTG 1282
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || |||||||| || || |||||||||||
Sbjct 1283 TCTTCCCCGTCAAAGTCTTGACAAAAATTTGCAT 1316
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| |||||||||||||| || | ||| | | ||
Sbjct 1332 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCCGCCAAGGTCCTTCCATC 1391
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| ||||| || ||| | || | | ||||||||| |||||||| || || || ||
Sbjct 1392 CTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTC 1451
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | |||||||| ||| || | ||||| || || || | ||| | |
Sbjct 1452 TTGGA-TCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTG 1510
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || ||||| || || || || ||||||||
Sbjct 1511 TCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 1544
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || ||||| || ||||||||||| || | || || | |||
Sbjct 2017 AGGACAAGATGGAGGGTAGACTCTTTCTGGATGTTGTAATCAGCAAGTGTTCGGCCATCT 2076
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| | || |||| |||||| || |||||||| ||||| || |||
Sbjct 2077 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2136
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || ||| || || || | ||| | |||
Sbjct 2137 TG-AATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGT 2195
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| ||||| | || || || || || |||||
Sbjct 2196 CTTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 2228
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| | ||| | || || || || || ||||| || ||||| | || | | |||| ||
Sbjct 879 CACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAGTCCTCCCGTCCTC 938
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
||| || || || ||| | || | ||||||||||| || ||||| || || || |||||
Sbjct 939 AAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 998
Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412
| | |||||||| ||| || | ||||| || || || | || | ||||
Sbjct 999 -AATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGTCT 1057
Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || |||||||| || || |||||||||||
Sbjct 1058 TCCCAGTCAAAGTCTTGACAAAAATTTGCAT 1088
>seq6347
Length=16439
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || ||||| |||||||||||||||||||| | || | | ||
Sbjct 12804 AGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTGCTAGAGTCCTTCCATCC 12863
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| |||| | || ||||||||| || || || ||||| || |||
Sbjct 12864 TCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCT 12923
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | || ||| || || || | || | ||||
Sbjct 12924 TGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCAAGGGTAATGGTC 12983
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| || || || ||||| |||||
Sbjct 12984 TTCCCTGTCAATGTCTTCACAAAAATCTGCAT 13015
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || ||||| || || |||||||| || | || | | ||
Sbjct 12576 AGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCC 12635
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| ||| |||| | ||||||||||| || ||||| |||||||| |||
Sbjct 12636 TCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCT 12695
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| || || | || || || || || | || | |||
Sbjct 12696 TGGATCTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAACCTCCAGGGTGATTGTC 12755
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| || || || || ||||| |||||
Sbjct 12756 TTGCCGGTTAATGTCTTCACAAAAATCTGCAT 12787
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || || || | || || || ||||| |||||||| || ||
Sbjct 13245 CCACCACGCAGACGAAGGACAAGGTGGAGTGTGGACTCCTTTTGTATGTTGTAGTCAGCT 13304
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || || | ||| || |||||| | || | | |||||| || ||||||
Sbjct 13305 AGAGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 13364
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| |||||| ||| ||| || | || ||| | || ||
Sbjct 13365 ATTCCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACC 13424
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||| |||||||| ||||| || || || |||||
Sbjct 13425 TCAAGAGTAATTGTCTTCCCGGTCAAGGTTTTCACAAAGATCTGCAT 13471
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || || || | || || || || || ||||| || |||||
Sbjct 13701 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCA 13760
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || || | ||||| || ||| | || |||| ||||| || ||||||
Sbjct 13761 AGAGTTCTACCATCCTCCAATTGCTTTCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGA 13820
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| || ||| ||| ||| || | ||| ||| || ||
Sbjct 13821 ATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAACC 13880
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||||| ||||||||| || | || || || || ||||||||
Sbjct 13881 TCGAGAGTTATGGTCTTGCCAGTAAGGGTCTTAACAAAGATTTGCAT 13927
>seq24164
Length=196930
Score = 104 bits (114), Expect = 2e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||| |||||||||||||| || | || || | ||||| |||||||| ||||| | |
Sbjct 29744 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 29685
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372
| | ||||||||||| || ||||| ||||| || ||||| | | || ||||| |||
Sbjct 29684 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTG-AATCTTAGCTTTGACATTG 29626
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | | || ||||| | || | ||||| || || | |||||| |||
Sbjct 29625 TCAATAGTGTCGCTCGATTCAACTTCGAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 29566
Query 64433 AAAATTTGCATTTT 64446
|| || ||||||||
Sbjct 29565 AAGATCTGCATTTT 29552
>seq51266
Length=1200
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/213 (71%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| || || ||||| | || ||||| |||| | |||||| | ||
Sbjct 331 AGGACAAGATGAAGAGTAGACTCTTTGCGGATATTGTAGTCTGTAAGGGTGCGGCCATCC 390
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | ||||||| ||| || || || |||| ||| || || ||
Sbjct 391 TCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGAA-TCCCTCCTTGTCC 449
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|||| | |||||||| ||| || | |||||| | ||||| || | || | ||
Sbjct 450 TGTA-TCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCATTGTGATTGT 508
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || |||| ||| || || || || |||||
Sbjct 509 CTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 541
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/121 (77%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| |||||||| ||||||||||||||||| | ||| | | |||||||| |||| ||
Sbjct 804 GTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCA 863
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
| | | || | | |||||||| |||||||| || ||||| ||||| | | ||||||||
Sbjct 864 GAAAAGATCAATCTCTGCTGGTTTGGAGGAATACCCTCTTTGTCTTGGA-TCTTTGCTTT 922
Query 64367 A 64367
|
Sbjct 923 A 923
>seq43689
Length=21515
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || || || || ||||||||||| || | || || ||||
Sbjct 1505 AGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCC 1446
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| ||||| | || |||| ||||| || || ||||||||||| || ||
Sbjct 1445 TCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCC 1386
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||||| ||||| |||| || | |||
Sbjct 1385 TGGATCTTGGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTC 1326
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | |||||| || || || |||||
Sbjct 1325 TTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 1294
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || || || | || || || || || || ||||| || ||
Sbjct 2661 ACCACCGCGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGC 2602
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | |||||||||||||| || ||| | || |||| ||||||||| || ||
Sbjct 2601 AAGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGG 2542
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| || ||||| || || | | || ||||| ||| || | || ||| ||||
Sbjct 2541 GATCCCCTCTTTGTCCTG-AATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCA 2483
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| || | || | |||||| ||||| || || || || || || ||||||
Sbjct 2482 CCTCCAAGGTGATGGTCTTACCGGTTAAGGTCTTCACAAAGATCTGCATT 2433
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||| | |||| || || || || ||||||||||| || || | |||||| |
Sbjct 2420 CTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCA 2361
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| |||||||| || || || | || | || ||||||||| || ||||| || || ||
Sbjct 2360 TCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTG 2301
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
||||| || || ||| ||| || | || || | || || || | |||| |
Sbjct 2300 TCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTTATG 2241
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| | || || || ||||| |||||
Sbjct 2240 GTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 2206
>seq15487
Length=17016
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| |||||||| ||||||||||||||||| | ||| | | |||||||| |||| ||
Sbjct 16620 GTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCA 16679
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | | |||||||| |||||||| || || || ||||| | | ||||||||
Sbjct 16680 GCAAAGATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTGTCTTGGA-TCTTTGCTTT 16738
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| | | ||||| || || || | ||| | ||||| || ||||| ||
Sbjct 16739 AACATTGTTGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGT 16798
Query 64426 TTTTACGAAAATTTGCAT 64443
|| || || ||||||||
Sbjct 16799 CTTGACAAATATTTGCAT 16816
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/137 (75%), Gaps = 1/137 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| ||||||||||||||||| | ||| | | ||
Sbjct 16467 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATC 16526
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||| |||| || ||| | || | | |||||||| |||||||| || || || ||
Sbjct 16527 TTCAAGTTGCTCTCCAGCAAAGATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTGTC 16586
Query 64351 TTGTATTTTTTGCTTTA 64367
||| | | |||||||||
Sbjct 16587 TTGGA-TCTTTGCTTTA 16602
>seq25243
Length=7086
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || ||||||| || |||||||| |||||||||||||| || | ||| || |
Sbjct 5391 CTCAGAACAAGATGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCCAGGGTTCGACCA 5332
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| | || || || ||| |||| || | |||||| || ||||| || ||||||||
Sbjct 5331 TCTTCCAATTGTTTCCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGTATGCCTTCTTTA 5272
Query 64349 TCTTG 64353
|| ||
Sbjct 5271 TCCTG 5267
>seq6200
Length=22545
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || || || || || |||||||| || || | || || | ||
Sbjct 22083 AGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCC 22142
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| |||| | ||||||||||| || ||||| ||||| || ||
Sbjct 22143 TCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 22202
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || || | || || |||| || | ||
Sbjct 22203 TGGA-TCTTGGCTTTGACATTATCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGT 22261
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | ||||| ||||| || ||||| ||
Sbjct 22262 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 22297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499247182668160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |