Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq63210 111 2e-19 >seq63210 Length=11074 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41000 ATGCCGGACGCGCACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACGCAAGGT 41059 ||||||||||| ||| ||| ||||| ||| || || ||||| ||| | || | || Sbjct 6833 ATGCCGGACGCCCACCTCGGCCTCGGCGCCACCGTGGGCTCGGTCATCCCGACCCTCGGC 6892 Query 41060 GCCATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGCGGTTCGTA-C 41118 || ||||| |||||||| || |||||||||||||||||||||||| | ||||| || | | Sbjct 6893 GCGATCATGCCGGCGGCCGTCGGCGTGGACATCGGCTGCGGCATGATCGCGGTCCGGACC 6952 Query 41119 CAGTCTCAAGGCCAGTCAGTTGCCGGACAACCTGCGCGATGTTCGCTTGCAGATCGAACG 41178 |||| ||| | | | |||| | |||||| | | ||| ||||||||| || Sbjct 6953 CAGT-TCACGAAGGGCGACCTGCCCACCGACCTGCAGGGGCTCCGCGAGCAGATCGAGCG 7011 Query 41179 CGACATCCCGCTG 41191 | |||||||||| Sbjct 7012 GGCCATCCCGCTG 7024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739299197129600