Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_011291.1 Length=47057 Score E Sequences producing significant alignments: (Bits) Value seq63378 82.4 2e-11 >seq63378 Length=15302 Score = 82.4 bits (90), Expect = 2e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 223 CGATTGGTGGGACACCTGGCGCACCTCGGCGCAGGCGCAGAAGTTCACCGCGACCGACTG 282 ||| |||||||||| ||| |||||| | | ||| | ||||||||||||||||| Sbjct 2348 CGAGTGGTGGGACATGTGGGCGACCTCGCCCCTCTCGCTCGACTTCACCGCGACCGACTG 2407 Query 283 GGCGTTCCTGTTGGACACCGCGGTGTTGCACGCCGAGTTCTGGCTCGGCAATCGTTCGTT 342 | | ||| |||||||| | | ||||| | |||| |||| | | | Sbjct 2408 GTCCGAGCTGCGCGACACCGCACTCATCCACGCGCGCTACTGGAACGGCGACATCAAGCT 2467 Query 343 GGCCGGCGAGCTGCGGCTGCGGGCGGCGAAGTTCGGTGCGACGCCCGAGGATCGGGCGCG 402 |||| |||||| || || || | ||||||||||| ||||| |||||||| || ||||| Sbjct 2468 CGCCGCCGAGCTCCGTCTCCGCACCGCGAAGTTCGGCGCGACCCCCGAGGACCGCGCGCG 2527 Query 403 GCT 405 ||| Sbjct 2528 GCT 2530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150347050130592