Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq63545 114 3e-21
>seq63545
Length=90175
Score = 114 bits (126), Expect = 3e-21
Identities = 245/360 (68%), Gaps = 11/360 (3%)
Strand=Plus/Minus
Query 8770 CTCGGGATGATTGTCGTTGACTACCTGCAGCTGATG---TCGGGTGACGGCGGCGGATCT 8826
||| | ||| | ||| | |||||||||||||||||| ||||| | | || ||
Sbjct 71248 CTCCGCATGGTCGTCATCGACTACCTGCAGCTGATGACCTCGGGCAA-GAAGGTCGA--- 71193
Query 8827 GAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAA 8886
|| || || | |||||| |||| | ||||| || ||||| | || |||||||||
Sbjct 71192 GAGTCGCCAGCAA--GAGGTCTCCGAGTTCTCGCGTGCGCTCAAGCTCATGGCGAAGGAA 71135
Query 8887 CTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAAC 8946
|| | || || || | || ||||||||||| || || || | |||| | || | ||
Sbjct 71134 CTGCAGGTCCCCGTCGTGGCCCTGTCGCAGCTGAACCGTGGTCCCGAGCAGCGGGCCGAC 71075
Query 8947 AAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTG 9006
||| ||| | || ||||| ||||| || || || ||||||||||||| |||||| ||
Sbjct 71074 AAGAAGCCGATGATCTCCGACCTGCGTGAATCCGGCTCGATCGAGCAGGACGCCGACATG 71015
Query 9007 ATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCC 9066
|| || | | ||||||| || || | |||| | | | ||| |||
Sbjct 71014 GTCATCCTGCTGCACCGCGAGTCGGCGTACGAGAAGGACAACCCGCGGCAGGGTGAGGCG 70955
Query 9067 GAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGT-ACGGCTCGCATTCCA 9125
|| ||||| | |||||||| || ||||| |||| | |||| | |||| | || |||||
Sbjct 70954 GACCTCATCGTGGCGAAGCACCGCAACGGACCGACGGACACCATCACGG-TGGCGTTCCA 70896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127449174250944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |