Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_013650.1 Length=155445 Score E Sequences producing significant alignments: (Bits) Value seq61823 111 2e-19 >seq61823 Length=3776 Score = 111 bits (122), Expect = 2e-19 Identities = 114/147 (78%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 113817 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 113876 ||||||||| ||||| |||| | || ||| |||| | |||| ||| |||||||| Sbjct 1488 CGGCCCGGGTCGTGGTTCCGGTGCCGGTTCGATGGTGGCGTACGCGATGCGCATCACCGA 1547 Query 113877 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCC 113934 ||||||||||| | ||| ||||| |||||||| ||| |||||||||||||| | | Sbjct 1548 CCTCGACCCGATCCGGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCGGACCGCGTCTC 1607 Query 113935 GACTTCCCCGACATCGACGTCGACTTC 113961 || | |||||| |||||||||||||| Sbjct 1608 GA--TGCCCGACTTCGACGTCGACTTC 1632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496900251843200