Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 571 2e-158
seq63621 473 4e-129
seq43996 370 3e-98
seq34978 141 3e-29
seq1857 131 5e-26
seq59810 120 9e-23
seq2280 107 6e-19
seq986 86.0 2e-12
seq21547 84.2 7e-12
>seq4583
Length=37858
Score = 571 bits (632), Expect = 2e-158
Identities = 721/989 (73%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250
||| ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 35924 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 35983
Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310
||| |||||||| | || ||| ||||||||| || | | ||| | |||||| ||
Sbjct 35984 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 36043
Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370
|| || ||||| || || || || || || |||||||||||| ||| || | || |||
Sbjct 36044 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 36103
Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430
|| ||| || | || || ||||||| ||| | |||||| ||||| ||| |||||
Sbjct 36104 AAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 36163
Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490
|| |||||||| |||||||| | || ||||| || |||||||| || || || |||||
Sbjct 36164 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 36223
Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550
|||||||||||||| |||||| | || || | || ||| | | || |||||
Sbjct 36224 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 36283
Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610
| || | |||||| || | |||||||||||| ||| | | || |||||
Sbjct 36284 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 36343
Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670
||||||||| || || | |||||| || || ||||||||||| ||||| || ||||||||
Sbjct 36344 TACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 36403
Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730
||| | ||| || || |||||||||||||| || ||||||||||||||| ||||||||
Sbjct 36404 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 36463
Query 5731 CTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790
|| || | ||||| | || || |||| | || || ||||| || |||||||||||
Sbjct 36464 TTGACCAATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 36523
Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850
|| |||||| |||||||| || | | | | ||||| ||||| | || |||| |||
Sbjct 36524 AACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTA 36583
Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910
| || | |||| | |||||| | || | |||| || || || || ||||| |
Sbjct 36584 ACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 36643
Query 5911 CCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968
||||||||| | ||| || ||||||||||| || || || ||||| || || ||
Sbjct 36644 CCATTCATCAACGGAT--GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 36701
Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACG 6028
|| | || | || ||| || | || ||||||||| | || |||||||| |||| ||
Sbjct 36702 GAAGTAGGAATAATGGCACCGAAAATAATGTTGTTTTCGTAAAGTAGAGACCCTGAAACA 36761
Query 6029 GGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCA 6088
|||||||| || || || ||||| ||||| || ||||| | ||| || | | |||| ||
Sbjct 36762 GGTTCACGAATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAACAAATACA 36821
Query 6089 GTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGG 6148
| |||||| || || | | || ||||| || ||||||||||| || | || || |||
Sbjct 36822 GAAGTTGCCGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 36881
Query 6149 TTGTTGGTGCTAGTAACCCAGTCACAGAA 6177
|| | |||||||| | ||||| ||||||
Sbjct 36882 TTTTCAGTGCTAGTTATCCAGTTACAGAA 36910
>seq63621
Length=23796
Score = 473 bits (524), Expect = 4e-129
Identities = 601/825 (73%), Gaps = 4/825 (0%)
Strand=Plus/Plus
Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250
||| ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||
Sbjct 19953 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 20012
Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310
||| |||||||| | || ||| ||||||||| || | | ||| | |||||| ||
Sbjct 20013 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 20072
Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370
|| || ||||| || || || || || || |||||||||||| ||| || | || |||
Sbjct 20073 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 20132
Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430
|| ||| || | || || ||||||| ||| | |||||| ||||| ||| |||||
Sbjct 20133 AAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTTGTT 20192
Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490
|| |||||||| |||||||| | || ||||| || |||||||| || || || |||||
Sbjct 20193 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 20252
Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550
|||||||||||||| |||||| | || || | || ||| | | || |||||
Sbjct 20253 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 20312
Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610
| || | |||||| || | |||||||||||| ||| | | || |||||
Sbjct 20313 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 20372
Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670
||||||||| || || | |||||| || || ||||||||||| ||||| || ||||||||
Sbjct 20373 TACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 20432
Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730
||| | ||| || || |||||||||||||| || ||||||||||||||| ||||||||
Sbjct 20433 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 20492
Query 5731 CTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790
|| || | ||||| | || || |||| | || || ||||| || |||||||||||
Sbjct 20493 TTGACCAATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 20552
Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850
|| |||||| |||||||| || | | | | ||||| ||||| | || |||| |||
Sbjct 20553 AACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTA 20612
Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910
| || | |||| | |||||| | || | |||| || || || || ||||| |
Sbjct 20613 ACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 20672
Query 5911 CCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968
||||||||| | ||| || ||||||||||| || || || ||||| || || ||
Sbjct 20673 CCATTCATCAACGGAT--GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 20730
Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGT 6013
|| | || | || ||| || || || ||||||||||| || |||
Sbjct 20731 GAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGT 20775
Score = 316 bits (350), Expect = 6e-82
Identities = 398/546 (73%), Gaps = 4/546 (1%)
Strand=Plus/Plus
Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250
||| ||||| || || |||||||| | |||||| ||||| ||||| ||||||||||||||
Sbjct 20924 AGCAGCTAGGTCTAGAGGGAAGTTATAAGCATTACGTTCATGCATAACTTCCATACCAAG 20983
Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310
||| |||||||| | || ||| |||||| || || | | ||| | |||||| ||
Sbjct 20984 GTTAGCACGGTTGATGATATCAGCCCAAATGTTAATTACACGACCTTGACTGTCAACTAC 21043
Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370
|| || ||||| || || || || || ||| |||||||| ||| || | || |||
Sbjct 21044 AGATTGGTTGAA----AAACCATTTAGGTTGAAAACCATAGTGCTGATACCTAAAGCGGT 21099
Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430
|| ||| || | || || ||||||| ||| | |||||| ||||| || |||||
Sbjct 21100 AAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACAAGAGTTGTT 21159
Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490
|| |||||||| |||||||| | || ||||| || |||||||| || || | |||||
Sbjct 21160 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGCTATTATA 21219
Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550
|||||||||||||| || ||| | || || | || ||| | | || |||||
Sbjct 21220 AGTTTCTTCCTCTTGACCAAATCTGTAACCTTTATTAGCAGATTCATTTTCTGTGGTTTC 21279
Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610
| || | |||||| || | |||||||||||| ||| | | || |||||
Sbjct 21280 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 21339
Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670
||||| ||| || || | |||||| || || ||||||||||| ||||| || ||||||||
Sbjct 21340 TACCCTAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 21399
Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730
||| | ||| || || |||||||||||||| | ||||||||||||||| ||||||||
Sbjct 21400 TACAATCATGAAATTGAAAGTACCAGAGATTCTGAGAGGCATACCATCAGAAAAACTTCC 21459
Query 5731 CTGTCC 5736
|| ||
Sbjct 21460 TTGACC 21465
>seq43996
Length=12529
Score = 370 bits (410), Expect = 3e-98
Identities = 587/838 (70%), Gaps = 14/838 (2%)
Strand=Plus/Plus
Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250
||| ||||| || || |||||| | |||||||| ||||| ||||| |||||||||||||
Sbjct 804 AGCAGCTAGGTCTAGAGGGAAGGTATGAGCATTACGTTCATGCATAACTTCCATACCAAT 863
Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310
||| ||||| || | || ||| ||| ||||| || | | | | | ||||| ||
Sbjct 864 GTTAGCACGATTGATGATATCAGCCTAAGTGTTAATTACACGATCCTGACTATCAACTAC 923
Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370
||||| ||||| || || || || || || ||||||||||| ||| || | || |||
Sbjct 924 AGACTGGTTGAAATTGAAACCATTTAGGTTGCAAGCCATAGTGCTGATACCTAAAGCGGT 983
Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430
|| | |||| | || || ||||||| | |||||||| |||| ||| |||||
Sbjct 984 AAACAATATACCTACTACAGGCCAAGCAATTAGGAAGAAGTGTATTGAACGAAAGTTGTT 1043
Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490
|| |||||||| |||||||| | || ||||| || |||||||| || || || |||||
Sbjct 1044 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 1103
Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550
|||||||||||||| || ||||| || || | || ||| | || |||||
Sbjct 1104 AGTTTCTTCCTCTTGACCAAATTTGTAACCTTCATTAACAGATTCATTTTTTGTGGTTTC 1163
Query 5551 ACGAATGAGCGA---AGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACC 5607
|||| | | |||| | || | ||||||||| || || | | || |
Sbjct 1164 ---CATGATCAAACTAGAACTTACCAAGGAACCATGCATAACACTTAATAGGGAGCCGCT 1220
Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667
||||||||||| || || | |||||| || || ||||||||||| ||||| | |||
Sbjct 1221 AAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCT----CTG 1276
Query 5668 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACT 5727
||||| | ||| || || |||||||||||||| || | | | |||| || | |||||
Sbjct 1277 GAATATAATCATGAAATTGAAAGTACCAGAGATTCCTAAAAGAATACTATTAGAAAAACT 1336
Query 5728 TCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATA 5787
|| || ||| ||||| | || || |||| | || | ||||| || ||||||||
Sbjct 1337 TCATTGATCGATTGGGTAGATCAAGAAAACTGCGATAGCAGTTGCAACTGGAGCTGAATA 1396
Query 5788 TGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAA 5847
||| || |||||| |||||||| || | | | | ||||| ||||| | || ||||
Sbjct 1397 TGCAACATCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCAT 1456
Query 5848 GTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTA 5907
|||| || | |||| | |||||| | || | |||| || || || || |||||
Sbjct 1457 GTAACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTA 1516
Query 5908 AAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCG 5965
| ||||||||| | ||| || ||||||||||| || || || ||||| || || ||
Sbjct 1517 TAACCATTCATCAACGGAT--GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCT 1574
Query 5966 TTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTG 6023
|| | || | || ||| || || || ||||||||||| || |||||||| ||||
Sbjct 1575 GCAGAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTG 1632
Score = 109 bits (120), Expect = 2e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 5903 TTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATT 5962
||||| | ||||||||| | | || |||||||| || ||||| || | ||| || ||
Sbjct 1637 TTGTATAACCATTCATCAACAGAAGCCGCTTCCCAAATTGGATAAAAATATAAACCTATA 1696
Query 5963 GCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCT 6022
|| || | || | || ||| || || || |||||||||||||| |||||||| |||
Sbjct 1697 GCTGCAGAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCATAAAGTAGAGACCCT 1756
Query 6023 GCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATA 6082
| |||| | | || || || ||||| ||| | || ||| | | ||| || | |||
Sbjct 1757 AAAATAGGTTAATGAATACCATCAATGTCTACTAGAGGAGCAACAATGAAGGCAATAATA 1816
Query 6083 AATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCC 6135
||| ||| |||| | || || | | | ||||| || ||||||||||| ||
Sbjct 1817 AATACAGAAGTTTCCGTCAATAAGGTAAGGATCATCAAAACACCAAACCATCC 1869
>seq34978
Length=12172
Score = 141 bits (156), Expect = 3e-29
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 5980 AACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTAT 6039
|| ||| || || || ||||||||||| || |||||||| |||| || |||||||| ||
Sbjct 5258 AATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAAT 5317
Query 6040 GCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGT 6099
|| || ||||| ||||| || ||||| | ||| || | |||||| ||| |||||| ||
Sbjct 5318 ACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTTGCCGT 5377
Query 6100 TAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCT 6159
|| | | || ||||| || ||||||||||| || | || || ||||| | |||||
Sbjct 5378 CAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCT 5437
Query 6160 AGTAACCCAGTCACAGAA 6177
||| | ||||| ||||||
Sbjct 5438 AGTTATCCAGTTACAGAA 5455
>seq1857
Length=125658
Score = 131 bits (144), Expect = 5e-26
Identities = 155/209 (74%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250
||| ||||| || || |||||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 75672 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTTATGCATAACTTCCATACCAAG 75613
Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310
||| ||| || | || ||| ||||||||| || | | ||| | |||||| ||
Sbjct 75612 GTTAGCATAATTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 75553
Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370
|| || ||||| || || || || || || |||||||||||| ||| || | || |||
Sbjct 75552 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCGGT 75493
Query 5371 AAGCCATATGCAAACGACGGGCCA-AGTA 5398
|| ||| || | || || ||||| ||||
Sbjct 75492 AAACCAGATACCTACTACAGGCCAGAGTA 75464
>seq59810
Length=2273
Score = 120 bits (132), Expect = 9e-23
Identities = 188/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485
||||| || |||||||| |||||||| | || ||||| || ||||||| || || ||
Sbjct 246 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAAGCATGAGCGGCTACGATA 305
Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545
|| || |||||||||||||| |||||| | || || | || ||| | | ||
Sbjct 306 TTCTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 365
Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605
|||| | || | |||||| || | ||||||||||| ||| | | ||
Sbjct 366 CTTTCCCTGATCAAACTAGAAGTTACCAAGGAAGCATGCATAGCACTGAATAGGGAGCCG 425
Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665
|| ||| ||||| | || | ||||| || || ||||||||||| ||||| || |||
Sbjct 426 CCTTTTACACCAGCTAGGCCTAAGATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 485
Query 5666 TGGAATACGAACATAAAGTTAAAAGTACC 5694
|||||||| | ||| || || ||||||||
Sbjct 486 TGGAATACAATCATTAAATTGAAAGTACC 514
>seq2280
Length=1098
Score = 107 bits (118), Expect = 6e-19
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 5357 ATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAA 5416
|| || | || ||||| ||| || | || || ||||||| | | | |||||| |||||
Sbjct 850 ATACCTAAAGCGGTAAACCAGATACCTACTACAGGCCAAGCAACTAAGAAGAAGTGTAAC 909
Query 5417 CTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCC 5476
||| ||||| || |||||||| |||||||| | || ||||| || ||||||||
Sbjct 910 GAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCAGCCAAAATAACCATGAGCG 969
Query 5477 GCAACAATGTTATACGTTTCTTCCTCTTGGCCGAATTTATATCC 5520
|| || || ||||| |||||||||||||| ||||| | || ||
Sbjct 970 GCTACGATATTATAAGTTTCTTCCTCTTGATCGAATCTGTAACC 1013
>seq986
Length=74774
Score = 86.0 bits (94), Expect = 2e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 5702 CCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAG 5761
|| ||||||||||||||| |||||||| || |||| ||||| | || || |||| |
Sbjct 27017 CCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAGATCAAGAAAACTGTG 26958
Query 5762 TAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCATGGTCGCATTCCTAATCTG 5821
|| | ||||| || ||||||||||| || |||||| ||||||| || | | |
Sbjct 26957 GTAGCAGTTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCACACCCAGACAG 26898
Query 5822 TAACTAAGTTCCCATTGGCGTCCCAAGTAA 5851
| ||||| ||||| | || |||| ||||
Sbjct 26897 AAGCTAAGCTCCCACTCACGACCCATGTAA 26868
>seq21547
Length=11211
Score = 84.2 bits (92), Expect = 7e-12
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 6038 ATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCG 6097
|| || || ||||| ||||| || ||||| | ||| || | |||||| || ||||||
Sbjct 215 ATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAAAAGTTGCC 274
Query 6098 GTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTG 6157
| || | | || ||||| || ||||||||||| || | || || ||||| | |||
Sbjct 275 ATCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTG 334
Query 6158 CTAGTAACCCAGTCACAGAACTTATCCCA 6186
||||| | ||||| |||||| | | ||||
Sbjct 335 CTAGTTATCCAGTTACAGAAGTAACCCCA 363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152534195375904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |