Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq63545 120 1e-22 >seq63545 Length=90175 Score = 120 bits (132), Expect = 1e-22 Identities = 198/281 (70%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 21286 CAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGC-- 21343 |||||| |||||| ||| || ||||||| | | ||||||||||| ||||| Sbjct 71153 CAAGCTCATGGCGAAGGAACTGCAGGTCCCCGTCGTGGCCCTGTCGCAGCTGAACCGTGG 71094 Query 21344 TCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCG 21403 |||| ||||||||| | ||||| |||||||| || |||||||| || ||||| || Sbjct 71093 TCCC--GAGCAGCGGGCCGACAAGAAGCCGATGATCTCCGACCTGCGTGAATCCGGCTCG 71036 Query 21404 ATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGAT 21463 ||||||||||||||||| || |||| | || ||||||| || ||| | ||| Sbjct 71035 ATCGAGCAGGACGCCGACATGGTCATCCTGCTGCACCGCGAGTCGGCGTACGAGAAGGAC 70976 Query 21464 ACCCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGCGAGCCAAGC 21523 | || | | || | ||| || | ||| | ||||||||||||||||| | | | Sbjct 70975 AACCCGCGGCAGGGTGAGGCGGACCTCATCGTGGCGAAGCACCGCAACGGACCGACGGAC 70916 Query 21524 ACTGT-TCGGTGCGCGTTCCTGGGTAAGTACTCGCGATTCG 21563 || | ||||| ||||||| || | || |||||| |||| Sbjct 70915 ACCATCACGGTG-GCGTTCCACGGGATGTTCTCGCGGTTCG 70876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156991622966496