Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq61823 100 2e-16 >seq61823 Length=3776 Score = 100 bits (110), Expect = 2e-16 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 47674 TGGGCTTCTGTGGCTACTTCCTGATGGTGCGCGACCTGATGAATCACAGCCGTGAA-ACT 47732 |||||||| |||||||||||| |||| |||| | || || | | ||| | Sbjct 1418 TGGGCTTCCCGGGCTACTTCCTGGTGGTCGCCGACTTCATCAA-CTGGTCGAAGAACAAC 1476 Query 47733 GGCATTCCTGTCGGGCCAGGTCGTGGTTCCTCTGCCGGTTCTCTGGTGGCGTGGTGCATC 47792 ||||| | |||||| || |||||||||||| ||||||||| ||||||||| || Sbjct 1477 GGCATCCGTGTCGGCCCGGGTCGTGGTTCCGGTGCCGGTTCGATGGTGGCGTACGCGATG 1536 Query 47793 GGCATAACCAACGTCGATCCTATCCGTCACGGTCTTCTGTTTGAGCGTTTCATCAACCCT 47852 |||| ||| || |||| || ||||| ||||| || | || ||||| ||| ||||||| Sbjct 1537 CGCATCACCGACCTCGACCCGATCCGGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCG 1596 Query 47853 GA--ACGTCTCGA 47863 || |||||||| Sbjct 1597 GACCGCGTCTCGA 1609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330175616159040