Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq32996 113 3e-20 seq6347 105 5e-18 seq46021 104 2e-17 seq16715 102 6e-17 seq43689 100 2e-16 seq51266 93.3 3e-14 >seq32996 Length=3898 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||||||||||||| || || ||| || || || || || || | ||| | | || Sbjct 874 CGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAGTCCTCCCG 933 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || || | || ||||| ||||| |||| |||||| || || | ||||| ||||||||| Sbjct 934 TCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTCCTTG 993 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||||| ||| ||| | | | ||||| ||| ||||||| ||||| Sbjct 994 TCTTGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATT 1053 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||||||| || |||||||| ||||| Sbjct 1054 GTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 1088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 48532 AGTCGTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGT 48591 ||| ||| || || | |||| | || | ||| || || |||||| || ||||||| Sbjct 256 AGTAGTCCCCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGT 315 Query 48592 AATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGAT 48651 | || | || | || | || || | ||||||||| ||||| || || | |||||||| Sbjct 316 AGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGAT 375 Query 48652 CCG-TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGAC 48710 | | ||||| | || |||||||| |||||| ||| ||| | | || || || Sbjct 376 CTGGTGGGATC-CCTTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAG 434 Query 48711 GCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||||||||| || || || || || |||| ||| || ||||| ||||||||| Sbjct 435 CTCTCCACCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCATC 491 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 48546 CTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTT 48605 |||| |||||||||||||| || || ||| || || || || || || | ||| | Sbjct 663 CTTAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAGTC 722 Query 48606 CGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCC 48665 | |||| || | || ||||| ||||| |||| ||||| || || | ||||| ||| Sbjct 723 CTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGCTCTGGGGGAATACCC 782 Query 48666 TCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACC 48725 |||||||| ||||||| ||| ||| | | | ||||| ||| ||||||| Sbjct 783 TCCTTGTCTTGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAT 842 Query 48726 GTAATCGTTTTTCCCGTCAAAG 48747 ||||| || || || ||||||| Sbjct 843 GTAATTGTCTTCCCAGTCAAAG 864 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| |||||||| | | | | | || || | ||||| || ||||| Sbjct 1126 TCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAG 1185 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || ||| || || | ||||| |||||||| || ||||||| ||| || Sbjct 1186 ATCAATCTCTGCTGGTCTGGGGGAATACCCTCCTTATCTTGAATCTTTGCTTTGACGTTG 1245 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| ||| ||||||| ||||| || || ||||||||||| || ||| Sbjct 1246 TCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCCGTCAAAGTCTTGACA 1305 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 1306 AAAATTTGCAT 1316 >seq6347 Length=16439 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| || || |||| || | ||| | || |||| ||||||||| ||||| Sbjct 12369 TCTTTCTGAATGTTATAGTCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 12428 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| | ||| || || | ||| | |||||||| || |||||| || ||| | Sbjct 12429 ATCAACCTCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTA 12488 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| ||||||||||| |||||||| ||||| ||||| || || ||| Sbjct 12489 TCAATGGTATCTGAGCTCTCCACCTCCAAGGTAATCGTCTTTCCAGTCAATGTCTTGACA 12548 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 12549 AATATCTGCAT 12559 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| ||||| || ||||| |||| |||| ||| | || |||||||| Sbjct 13269 TGGAGTGTGGACTCCTTTTGTATGTTGTAGTCAGCTAGAGTTCTTCCATCCTCCAACTGT 13328 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||||||||| |||| || ||| ||||| | |||| || |||||||| || ||| Sbjct 13329 TTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATTTTT 13388 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | || || || ||| ||||| | ||||| || || || ||| Sbjct 13389 GCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCGGTC 13448 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| |||||||| Sbjct 13449 AAGGTTTTCACAAAGATCTGCAT 13471 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || ||||||||||| |||| ||| | ||| | || || | ||| Sbjct 13041 TGGAGGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGC 13100 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| |||| | || || || | |||| |||||||||||| ||| ||| Sbjct 13101 TTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATTTTT 13160 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | || ||||| || ||||| | ||||| || ||||| ||| Sbjct 13161 GCCTTAACATTGTCAATAGTGTCTGAGCTTTCAACCTCAAGGGTAATAGTCTTTCCAGTC 13220 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| |||||||| Sbjct 13221 AAGGTTTTCACAAAGATCTGCAT 13243 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| || ||| |||||| || ||||||||||||| ||| | | | | || || Sbjct 12578 CACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCCTC 12637 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | |||||| || ||||| || | ||||| || || | |||| || || ||||| Sbjct 12638 AAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTG 12697 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || || | | | | ||||| || ||||||| || || || || Sbjct 12698 GATCTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAACCTCCAGGGTGATTGTCTT 12757 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||||||||| Sbjct 12758 GCCGGTTAATGTCTTCACAAAAATCTGCAT 12787 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||||||| |||| ||||||||| || || || |||||||| |||||||| | | Sbjct 12789 CCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTGCT 12848 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | | | || || | ||| || || ||||| |||| | ||| || || | || Sbjct 12849 AGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 12908 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| ||||| || ||| || || ||| | | | || || ||| ||| Sbjct 12909 ATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACC 12968 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || || || ||||| || || |||||||||||||| Sbjct 12969 TCAAGGGTAATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCAT 13015 >seq46021 Length=44830 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| |||| ||| |||| | || || | |||||||||||| || Sbjct 38769 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCGGCGAA 38710 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||||||||| || | |||| ||| |||||||| |||||| || ||| Sbjct 38709 AATCAATCGCTGTTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATT 38650 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | ||||| | ||| ||||| | ||||| || || ||||||| || || || Sbjct 38649 GTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCAC 38590 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 38589 AAAGATCTGCAT 38578 >seq16715 Length=90750 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || |||||||||||||| | |||| | || Sbjct 66702 AGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGG 66761 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| ||||| | ||| || |||| ||| | ||| ||| Sbjct 66762 CCGTCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGGGTATGCCTTCC 66821 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| || | | | ||||| |||||||| | || Sbjct 66822 TTGTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTG 66881 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||| || | ||||| ||||| ||||||||| Sbjct 66882 ATAGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCATC 66920 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || ||| |||||||||||| |||||||||| || | || Sbjct 66474 AGACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGG 66533 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||| |||||||| ||||| | || || || | ||| | ||| ||| Sbjct 66534 CCGTCTTCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCC 66593 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| |||||||| | || Sbjct 66594 TTGTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCGAGGGTG 66653 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||| || | ||||| ||||| ||||||||| Sbjct 66654 ATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCATC 66692 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| |||||| | ||| || || || || |||||||||||||| | Sbjct 54113 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCC 54172 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || |||||||||||||| ||||| |||| | || || || | || Sbjct 54173 AGTGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGAGGG 54232 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| ||||| |||||| || ||| | | | || || |||||| Sbjct 54233 ATGCCCTCTTTGTCCTGAATCTTGGCCTTAACATTGTCGATGGTGTCAGAGCTTTCCACC 54292 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | ||||| || || || ||||| ||||| ||||| || |||||| Sbjct 54293 TCGAGGGTAATAGTCTTGCCAGTCAAGGTTTTGACAAAGATTTGCATC 54340 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || ||||| |||| | | | | | | || || | |||||| || ||||| Sbjct 53920 CTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAA 53979 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| | ||| ||||| | || | ||||||||||| |||||| || || Sbjct 53980 GATCAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTAACGTT 54039 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || |||| |||||| || || ||||| || ||||| || || || Sbjct 54040 GTCAATAGTATCAGAGCTCTCCGCCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTCAC 54099 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 54100 AAAAATCTGCAT 54111 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || ||||| || | ||| | | | || || | |||||| || ||||| Sbjct 65360 CTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCTGCAAA 65419 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| | ||| || |||| || | ||||||||||| |||||| || ||| Sbjct 65420 GATCAGCCTCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 65479 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || ||||||||||| || || ||||| || ||||| || || || Sbjct 65480 GTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTCAC 65539 Query 48755 AAAAATCTGCAT 48766 |||||||||||| Sbjct 65540 AAAAATCTGCAT 65551 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || ||||||||||||| || | || | || || Sbjct 54587 ACCAAGTGAAGAGTTGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGGCCATCCTCA 54646 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| |||| | || || || | ||||| ||| |||||||| | Sbjct 54647 AGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGA 54706 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || || ||||| | ||||| || ||| Sbjct 54707 ATCTTGGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTAATTGTCTTT 54766 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || | |||||| ||||| ||||||||| Sbjct 54767 CCAGTGAGAGTTTTAACAAATATCTGCATC 54796 >seq43689 Length=21515 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| || | ||||||||| || || ||| || || || |||||||||| | Sbjct 1520 CCTCCACGTAGACGGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCT 1461 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || |||| ||||||||||| ||||| || || || | || ||||||| |||| Sbjct 1460 AGAGTACGTCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGA 1401 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||| || || | | | || || |||||| Sbjct 1400 ATTCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACC 1341 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || ||||| || | |||||| ||||| ||||||||| Sbjct 1340 TCTAGGGTGATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATC 1293 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || |||||||| |||| || | || | || || | |||| Sbjct 2636 TGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGTCCATCTTCAAGCTGC 2577 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||| ||||| ||||| | ||| || || | ||||| | ||||| ||||| |||||| Sbjct 2576 TTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATC-CCCTCTTTGTCCTGAATCTT 2518 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | || || ||||||||||| || || || || || || Sbjct 2517 AGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTACCGGT 2458 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| |||||||| Sbjct 2457 TAAGGTCTTCACAAAGATCTGCAT 2434 >seq51266 Length=1200 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/193 (71%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| | |||||||| || | || | || | || || | ||||||||| ||||| Sbjct 351 CTCTTTGCGGATATTGTAGTCTGTAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAA 410 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || | ||||||||| | |||| ||||||||||| |||||| ||| ||| Sbjct 411 GATGAGCCTCTGTTGATCTGGTGGAAT-CCCTCCTTGTCCTGTATCTTTGCTTTCACATT 469 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || ||||||||||| || || || || || |||| ||| || || Sbjct 470 GTCAATAGTATCAGAGCTCTCCACCTCCATTGTGATTGTCTTCCCAGTCAGAGTCTTCAC 529 Query 48755 AAAAATCTGCATC 48767 ||| ||||||||| Sbjct 530 AAAGATCTGCATC 542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380642028611472