Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq63210 107 3e-18 seq63145 93.3 8e-14 >seq63210 Length=11074 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 169247 GGTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGCGTACGGGATCACCGC 169306 ||| || || || |||||||||||||||||||| |||||||| || ||| || | ||| Sbjct 6952 GGTCCGGACCGCGATCATGCCGCAGCCGATGTCCACGCCGACGGCCGCCGGCATGATCGC 6893 Query 169307 ATCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTACCCGGCGTGGACGTCGGGCAT 169366 | ||||||||| ||||| || |||| |||||| ||| |||| |||| ||||| Sbjct 6892 GCCGAGGGTCGGGATGACCGAGCCCACGGTGGCGCCGAGGCCGAGGTGGGCGTCCGGCAT 6833 Query 169367 CACCGCGACGTGCTTGAACACGAACGGCA 169395 | || | |||| |||||||||||||| Sbjct 6832 GAGGGCCAGGTGCGGGAACACGAACGGCA 6804 >seq63145 Length=9942 Score = 93.3 bits (102), Expect = 8e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 ||||||||||||||| |||||||||| | ||||||||||| | |||||| ||||||||| Sbjct 8532 GCGGGGTGGAGCAGTTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCAAAT 8591 Query 133023 CCCTCCCCCGCATCCA 133038 || |||||||| ||| Sbjct 8592 CCTGCCCCCGCAACCA 8607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895053549098880