Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq63210 107 3e-18
seq63145 93.3 8e-14
>seq63210
Length=11074
Score = 107 bits (118), Expect = 3e-18
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 169247 GGTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGCGTACGGGATCACCGC 169306
||| || || || |||||||||||||||||||| |||||||| || ||| || | |||
Sbjct 6952 GGTCCGGACCGCGATCATGCCGCAGCCGATGTCCACGCCGACGGCCGCCGGCATGATCGC 6893
Query 169307 ATCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTACCCGGCGTGGACGTCGGGCAT 169366
| ||||||||| ||||| || |||| |||||| ||| |||| |||| |||||
Sbjct 6892 GCCGAGGGTCGGGATGACCGAGCCCACGGTGGCGCCGAGGCCGAGGTGGGCGTCCGGCAT 6833
Query 169367 CACCGCGACGTGCTTGAACACGAACGGCA 169395
| || | |||| ||||||||||||||
Sbjct 6832 GAGGGCCAGGTGCGGGAACACGAACGGCA 6804
>seq63145
Length=9942
Score = 93.3 bits (102), Expect = 8e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
||||||||||||||| |||||||||| | ||||||||||| | |||||| |||||||||
Sbjct 8532 GCGGGGTGGAGCAGTTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCAAAT 8591
Query 133023 CCCTCCCCCGCATCCA 133038
|| |||||||| |||
Sbjct 8592 CCTGCCCCCGCAACCA 8607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895053549098880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |