Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq63531 111 2e-19 seq63495 87.8 3e-12 >seq63531 Length=42858 Score = 111 bits (122), Expect = 2e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 123074 TCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCC 123133 || || |||||||| ||||| || || ||||||||||| || || ||||| ||||| ||| Sbjct 32014 TCGTGCCAGCTGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATCGCC 31955 Query 123134 TCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTC 123193 || |||||||| |||| |||||| | || |||| || | | || || |||||| Sbjct 31954 TCGTACGCGCTGCTGACCCACATGATCGCGGCGCAGACCGGGCTCGAGGTCGGCGACTTC 31895 Query 123194 GTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGG 123242 |||||||| ||||| || || | ||| ||||||| | ||||||| Sbjct 31894 GTGTGGACCGGTGGCGACTGCCACGTCTACGACAACCACGTCGAGCAGG 31846 Score = 96.9 bits (106), Expect = 5e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || ||||| ||||| | | ||||| || || | |||| |||||| Sbjct 32434 GACCGCACCGGCACCGGCACGCGCAGCCTGTTCGGTGCGCAGCTCCGCTACGACCTGTCG 32375 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 || || |||||||| |||||||||| || ||| || || || | ||||| Sbjct 32374 AAGGGCTTCCCGCTCATCACGACCAAGCGCGTGCACTTCAAGTCGGTCGCGTACGAGCTG 32315 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 |||||||||||| ||||| |||| || | ||| | || || |||| | ||| Sbjct 32314 CTGTGGTTCCTCCGCGGCGACGGCAACGCCCGCTGGCTGCAGGAGCACGGCGTCCGCATC 32255 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGT 122659 ||| | || ||||| || || || || | ||||||||||||||||| ||| |||||| Sbjct 32254 TGGAACGAGTGGGCGGACGAGGACGGCGACCTCGGCCCGGTGTACGGCGTGCAGTGGCGT 32195 Query 122660 GAGTGGCC 122667 |||||| Sbjct 32194 TCGTGGCC 32187 >seq63495 Length=23585 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 |||||| ||| |||| ||| ||||||||||||||||||||||||||||||||| || ||| Sbjct 20292 TGTAGCGCAGCTGGT-TAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 20350 Query 169792 GTCAG 169796 ||||| Sbjct 20351 GTCAG 20355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777013160454400