Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_020865.1
Length=45730
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 486 6e-133
seq63621 441 2e-119
seq43996 322 1e-83
seq59810 125 2e-24
seq2280 118 3e-22
seq1272 114 4e-21
seq1857 113 1e-20
seq17562 111 5e-20
seq42595 98.7 3e-16
seq34978 82.4 2e-11
>seq4583
Length=37858
Score = 486 bits (538), Expect = 6e-133
Identities = 691/967 (71%), Gaps = 10/967 (1%)
Strand=Plus/Minus
Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTGCC 41314
||| | ||||||||||| | |||||||| || || | ||||| || | ||| ||| |
Sbjct 36889 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGAC 36831
Query 41315 GCTACAACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGA 41371
| |||||| | ||| |||| ||||| ||| || || || || ||||| |||||
Sbjct 36830 GG--CAACTTCTGTATTTGTTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGT 36773
Query 41372 ATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTC 41431
|| || ||||| || | || || || | || | |||||||| || | || ||| |
Sbjct 36772 ATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGAAAACAACATTATTTTCGGTGCCATT 36713
Query 41432 GTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTT 41491
|||| | | || || || |||| || |||||||| |||||||| || | ||
Sbjct 36712 ATTCCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTT 36653
Query 41492 GATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGC 41551
||||||||| | |||||||| ||||| | |||| | || | |||||| | |||||
Sbjct 36652 GATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGC 36593
Query 41552 GTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGG 41611
|| | ||||||||| || |||||||| ||||||| || || || ||| | || |||
Sbjct 36592 GTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGG 36533
Query 41612 ATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCG 41671
|| |||||| || || |||||||| || ||||| || || || ||| | | || ||
Sbjct 36532 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCA 36473
Query 41672 TTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTAC 41731
|||| || || ||||||||||| |||||| | || || || || || ||||| | |
Sbjct 36472 ATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTC 36413
Query 41732 ATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTG 41791
||| | || ||||||||||||||||| || |||||||| || ||||||||| | || ||
Sbjct 36412 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTA 36353
Query 41792 GCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCA 41851
|| || ||||| || || | ||| ||||||||| ||| | |||| || ||
Sbjct 36352 GCTGGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGT 36293
Query 41852 CTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAG 41911
| || | || || || ||| | | || || | ||||||| || |||||||||
Sbjct 36292 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 36233
Query 41912 GAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATAT 41971
||||| ||||| ||||| || || ||||| || |||||||| || | ||||||||||||
Sbjct 36232 GAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 36173
Query 41972 GCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGT 42031
||||| || || || || ||| | || ||||| | ||||| |||||||| ||||||
Sbjct 36172 GCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGT 36113
Query 42032 ATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTTTCAACTTGAATGGTTTCAACT 42089
|| |||||| | ||||| || || || |||||||||||| | ||||||||||| |
Sbjct 36112 ATCTGGTTTAC--CGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATT 36055
Query 42090 TTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTA 42149
| ||||||||| | | | | | || | || || ||||| |||||||| || | |
Sbjct 36054 TCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCA 35995
Query 42150 ACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTG 42209
||||||| |||||||| | || || |||||||| || || || || |||||||| || |
Sbjct 35994 ACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAG 35935
Query 42210 ACCTTGC 42216
|||| ||
Sbjct 35934 ACCTAGC 35928
>seq63621
Length=23796
Score = 441 bits (488), Expect = 2e-119
Identities = 589/817 (72%), Gaps = 4/817 (0%)
Strand=Plus/Minus
Query 41402 TATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACAC 41461
|| || |||||||| || || || ||| | |||| | | || || || ||||
Sbjct 20771 TACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACAT 20712
Query 41462 TTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTC 41521
|| |||||||| |||||||| || | ||||||||||| | |||||||| ||||| |
Sbjct 20711 TTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTAT 20652
Query 41522 CAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAA 41581
|||| | || | |||||| | ||||||| | ||||||||| || ||||||||
Sbjct 20651 GAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAG 20592
Query 41582 CTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCC 41641
||||||| || || || ||| | || ||||| |||||| || || |||||||| ||
Sbjct 20591 CTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCA 20532
Query 41642 GCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATG 41701
||||| || || || ||| | | || || |||| || || ||||||||||| ||||
Sbjct 20531 GCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATG 20472
Query 41702 CCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATT 41761
|| | || || || || || ||||| | |||| | || ||||||||||||||||| ||
Sbjct 20471 CCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATC 20412
Query 41762 CTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCT 41821
|||||||| || ||||||||| | || || || || ||||| || || | ||| |
Sbjct 20411 CTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGT 20352
Query 41822 GCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCA 41881
|||||||| ||| | |||| || || | || | || || || ||| | | ||
Sbjct 20351 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 20292
Query 41882 CAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCAC 41941
|| | ||||||| || |||||||||||||| ||||| ||||| || || |||||
Sbjct 20291 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 20232
Query 41942 GGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCAT 42001
|| |||||||| || | ||||||||||||||||| || || || || ||| | ||
Sbjct 20231 GGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACAC 20172
Query 42002 TTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TA 42059
||||| | ||||| |||||||| |||||||| |||||| | ||||| || || |
Sbjct 20171 TTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTAC--CGCTTTAGGTATCAGCA 20114
Query 42060 CCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGAC 42119
| |||||||||||| | ||||||||||| || ||||||||| | | | | | || |
Sbjct 20113 CTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTC 20054
Query 42120 AGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGC 42179
|| || ||||| |||||||| || | |||||||| |||||||| | || || ||||
Sbjct 20053 GTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGC 19994
Query 42180 ATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216
|||| || || || || |||||||| || ||||| ||
Sbjct 19993 ATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 19957
Score = 271 bits (300), Expect = 2e-68
Identities = 394/554 (71%), Gaps = 8/554 (1%)
Strand=Plus/Minus
Query 41665 TTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTT 41724
||| || |||| || || ||||||||||| |||||| | | || || || || ||
Sbjct 21475 TTAACCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTT 21416
Query 41725 CAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCT 41784
||| | |||| | || ||||||||||||||||| || |||||||| || ||||||||| |
Sbjct 21415 CAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTT 21356
Query 41785 GGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCAC 41844
|| || || | ||||| || || | ||| ||||||||| ||| | |||| ||
Sbjct 21355 AGGCGTAGCTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAAC 21296
Query 41845 GTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGG 41904
|| | || | || || || ||| | | || || | ||||||| |||||
Sbjct 21295 TTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGG 21236
Query 41905 TCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTT 41964
|||||||||||| ||||| |||| || || ||||| || |||||||| || | |||||
Sbjct 21235 TCAAGAGGAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTT 21176
Query 41965 CCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGT 42024
|||||||||||| || || || || || | || ||||| | ||||| ||||||||
Sbjct 21175 CCAATATGCTAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGT 21116
Query 42025 TGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTC--TACCATGGCTTTCAACTTGAATGGT 42082
|||||||| |||||| | ||||| || || || |||| ||||||| | ||||||
Sbjct 21115 AGTAGGTATCTGGTTTAC--CGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGT 21058
Query 42083 TTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGAC 42142
|| || ||||||||| | | | | | || | || || |||| ||||||||
Sbjct 21057 TT----TTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGAT 21002
Query 42143 ATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTC 42202
|| | |||||||| |||||||| | || || |||||||| || || || | ||||||
Sbjct 21001 ATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTC 20942
Query 42203 CCGCTTGACCTTGC 42216
|| || ||||| ||
Sbjct 20941 CCTCTAGACCTAGC 20928
>seq43996
Length=12529
Score = 322 bits (356), Expect = 1e-83
Identities = 563/817 (69%), Gaps = 8/817 (1%)
Strand=Plus/Minus
Query 41402 TATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACAC 41461
|| || |||||||| || || || ||| | |||| | | || || || ||||
Sbjct 1618 TACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACAT 1559
Query 41462 TTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTC 41521
|| |||||||| |||||||| || | ||||||||||| | |||||||| ||||| |
Sbjct 1558 TTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTAT 1499
Query 41522 CAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAA 41581
|||| | || | |||||| | ||||||| | ||||||||| || ||||||||
Sbjct 1498 GAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAG 1439
Query 41582 CTTAGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCC 41641
||||||| || || || ||| | || ||||| |||||| || || ||||| || ||
Sbjct 1438 CTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCATATTCAGCTCCAGTTGCA 1379
Query 41642 GCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATG 41701
|||| | || || ||| | | || || | | || | ||||||| || |||
Sbjct 1378 ACTGCTATCGCAGTTTTCTTGATCTACCCAATCGATCAATGAAGTTTTTCTAATAGTATT 1319
Query 41702 CCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATT 41761
| || || || || || || ||||| | |||| | | |||||| ||||||| ||
Sbjct 1318 CTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCCAG----AGCACAACATC 1263
Query 41762 CTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCT 41821
|||||||| || ||||||||| | || || || || |||||| | || | || |
Sbjct 1262 CTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTAGCGGCTCCCTATTAAGT 1203
Query 41822 GCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCA 41881
| |||||| ||| | |||| | || | || || || || || | | ||
Sbjct 1202 GTTATGCATGGTTCCTTGGTAAGTTCTAGTTTGATCATGGAAACCACAAAAAATGAATCT 1143
Query 41882 CAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCAC 41941
|| | |||||||| ||||||||||||||||| ||||| ||||| || || |||||
Sbjct 1142 GTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 1083
Query 41942 GGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCAT 42001
|| |||||||| || | ||||||||||||||||| || || || | ||| | ||
Sbjct 1082 GGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTTTCGTTCAATACAC 1023
Query 42002 TTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT--A 42059
||||| || ||| |||||||| |||||||| | |||| | ||||| || || |
Sbjct 1022 TTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTAC--CGCTTTAGGTATCAGCA 965
Query 42060 CCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGAC 42119
| ||||||| |||| | ||||||||||| || ||||| ||| | | | | | | | |
Sbjct 964 CTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAGTCAGGATC 905
Query 42120 AGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGC 42179
|| || ||||| | |||||| || | || ||||| ||| |||| | || || ||||
Sbjct 904 GTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACATTGGTATGGAAGTTATGC 845
Query 42180 ATGAGCGGAACGCACACAACTTCCCGCTTGACCTTGC 42216
|||| || || || || | |||||| || ||||| ||
Sbjct 844 ATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGC 808
>seq59810
Length=2273
Score = 125 bits (138), Expect = 2e-24
Identities = 194/277 (70%), Gaps = 0/277 (0%)
Strand=Plus/Minus
Query 41716 CGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTT 41775
||| || ||||| | ||| | || ||||||||||||||||| || |||||||| || ||
Sbjct 515 CGGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 456
Query 41776 TCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAG 41835
|||||| | || | || || ||| || || | ||| ||||||||| | |
Sbjct 455 TCACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC 396
Query 41836 CCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTA 41895
| |||| || || | || | || | || ||| | | || || | |||||
Sbjct 395 CTTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336
Query 41896 CAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCG 41955
|| || |||||||||||||| ||||| ||||| || || ||||| | |||||||| ||
Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276
Query 41956 GCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGT 41992
| ||||||||||||||||| || || || || |||
Sbjct 275 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 239
>seq2280
Length=1098
Score = 118 bits (130), Expect = 3e-22
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950
||||||| || | |||||||||||| ||||| ||||| || || ||||| || ||||||
Sbjct 1013 GGTTACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 954
Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010
|| | | ||||||||||||||||| || || || || ||| | || ||||| |
Sbjct 953 GGCTGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTA 894
Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040
| ||| |||||||| |||||||| ||||||
Sbjct 893 GTTGCTTGGCCTGTAGTAGGTATCTGGTTT 864
Score = 86.0 bits (94), Expect = 2e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 41924 AATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAAT 41983
||||| || || ||||| || |||||||| | | ||||||||||||||||| || ||
Sbjct 828 AATATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAAC 769
Query 41984 AATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040
|| || ||| | || ||||| | | ||| |||||||| |||||||| ||||||
Sbjct 768 AACTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTTT 712
>seq1272
Length=458668
Score = 114 bits (126), Expect = 4e-21
Identities = 194/279 (70%), Gaps = 3/279 (1%)
Strand=Plus/Minus
Query 41717 GGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTT 41776
|| || ||||| | |||| | || ||||||||||||||||| || |||||||| || |||
Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353
Query 41777 CACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGC 41836
||||| | || | || | ||| || || | ||| ||||||||| | | |
Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTCC 207293
Query 41837 CTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCA-CAG--AACTATGGT 41893
|||| || || | || | || | || ||| | | || | | || | |||
Sbjct 207292 TTGGTAACTTCTAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGGT 207233
Query 41894 TACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGT 41953
|| | ||||||||||||||||| |||| ||||| || || ||||| | ||||||||
Sbjct 207232 TAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGGC 207173
Query 41954 CGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGT 41992
|| | ||||||||||||||||| || || || || |||
Sbjct 207172 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 207134
>seq1857
Length=125658
Score = 113 bits (124), Expect = 1e-20
Identities = 148/203 (73%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 42016 CTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCT--ACCATGGCTTTCAAC 42073
||||||||| |||||||| |||||| | ||||| || || || ||||||||||||
Sbjct 75468 CTGGCCTGTAGTAGGTATCTGGTTTAC--CGCTTTAGGTATCAGCACTATGGCTTTCAAC 75525
Query 42074 TTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACC 42133
| ||||||||||| || ||||||||| | | | | | || | || || |||||
Sbjct 75526 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACT 75585
Query 42134 TGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCA 42193
|||||||| || | || ||| |||||||| | || || |||||| | || || ||
Sbjct 75586 TGGGCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCT 75645
Query 42194 CACAACTTCCCGCTTGACCTTGC 42216
|| |||||||| || ||||| ||
Sbjct 75646 CATAACTTCCCTCTAGACCTAGC 75668
>seq17562
Length=33771
Score = 111 bits (122), Expect = 5e-20
Identities = 181/261 (69%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 41732 ATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTG 41791
||| | || ||||||||||||||||| || |||||||| || |||||||| | || |
Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256
Query 41792 GCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCA 41851
|| || ||| || || | ||| ||||||||| | | | |||| || ||
Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCCTTGGTAACTTCTAGT 25196
Query 41852 CTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAG 41911
| || | || | || ||| | | || || | ||||||| || ||||||||
Sbjct 25195 TTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGAG 25136
Query 41912 GAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATAT 41971
||||| ||||| ||||| || || | ||| | |||||||| || | ||||||||||||
Sbjct 25135 GAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATAT 25076
Query 41972 GCTAGCTTTAATAATTCCCGT 41992
||||| || || || || |||
Sbjct 25075 GCTAGTTTCAACAACTCTCGT 25055
>seq42595
Length=4085
Score = 98.7 bits (108), Expect = 3e-16
Identities = 145/201 (72%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 41904 GTCAAGAGGAAGAGACTTAC-AATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATC 41962
||||||||||| | |||||| ||||||||||| | ||| || |||||||| | | |||
Sbjct 3520 GTCAAGAGGAAAAAACTTACTAATATTGTTGCCGTTCATGGTTATTTTGGCCAATTGATC 3461
Query 41963 TTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCT 42022
| | |||||| ||| || ||| | || | | | || ||||| |||||| | ||||
Sbjct 3460 TACTAATATGTTAGTTTGAATGACTCTCATTCGTTACACTTCTTCCTTGCTACTTGGCAC 3401
Query 42023 GTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACC---ATGGCTTTCAACTTGAAT 42079
| ||||||| |||||| | || || | || | || | ||| ||||||| | |||
Sbjct 3400 ATACTAGGTATCTGGTTTACCGCTTTTAG-GTAT-TAGCATTATGACTTTCAATCTAAAT 3343
Query 42080 GGTTTCAACTTTAACCAATCT 42100
||||||| | |||||||||
Sbjct 3342 AGTTTCAATTCCAACCAATCT 3322
>seq34978
Length=12172
Score = 82.4 bits (90), Expect = 2e-11
Identities = 131/185 (71%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTGCC 41314
||| | ||||||||||| | |||||||| || || | |||| ||| | ||| ||| |
Sbjct 5434 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGA-TCCCTACCTTATTGAC 5376
Query 41315 GCTACAACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGA 41371
| |||||| | |||||||| ||||| ||| || || || || ||||| |||||
Sbjct 5375 G--GCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGT 5318
Query 41372 ATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTC 41431
|| || ||||| || | || || || | || || |||||||| || || || ||| |
Sbjct 5317 ATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATT 5258
Query 41432 GTTCC 41436
||||
Sbjct 5257 ATTCC 5253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146103860451456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |