Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq4583 542 8e-150 seq63621 426 4e-115 seq43996 320 5e-83 seq34978 156 1e-33 seq1857 122 2e-23 seq59810 118 3e-22 seq2280 105 2e-18 seq21547 104 7e-18 seq1272 100 8e-17 seq17562 95.1 3e-15 >seq4583 Length=37858 Score = 542 bits (600), Expect = 8e-150 Identities = 722/996 (72%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | ||| ||| | ||||||||||| |||| |||||| Sbjct 36919 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 36860 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| |||| || | | | | | |||| ||| || | || ||||| Sbjct 36859 GGTGTTTTGATGAT-CCCTACCTTATTGACGGCAACTTCTGTATTTGTTATTGCCTTCAT 36801 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || || Sbjct 36800 TGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTA 36741 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 | |||||||| || | |||||| | | |||| | || || || ||||||| Sbjct 36740 CGAAAACAACATTATTTTCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACATTT 36681 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 || | ||||||||||| || |||| |||||| | ||||| || || |||||| | Sbjct 36680 TTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 36621 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACTTGGGACGCGAATGGGAA 42636 || | || | |||||| | | || || ||| | ||| |||| || || ||||| Sbjct 36620 ACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACATGGGTCGTGAGTGGGAG 36563 Query 42637 CTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCT 42696 ||| | ||| || || ||| | || ||||| |||||| || || || ||||| || Sbjct 36562 CTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCA 36503 Query 42697 GCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATG 42756 || || || ||||| ||| | |||| ||| |||| ||||| |||||| ||||| ||| Sbjct 36502 GCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATG 36443 Query 42757 CCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATT 42816 ||||| || || || ||||| ||||| |||||| | || ||||||||||| || ||||| Sbjct 36442 CCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATC 36383 Query 42817 CTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCA 42876 |||||||| || || || ||| | || || || || ||||| || || || | ||| Sbjct 36382 CTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGT 36323 Query 42877 GCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936 |||||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 36322 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 36263 Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996 ||| | || |||| |||||||||||||| || |||||||| || || || || ||| Sbjct 36262 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 36203 Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055 ||||| ||||| || | |||||||||||||| | |||| || || ||| || || || Sbjct 36202 GGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCGTTACA 36144 Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTAC 43115 |||||| | || |||||||| || || || || ||||| || || | || |||| || Sbjct 36143 CTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCAC 36084 Query 43116 TATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCA 43175 |||||| || ||| | |||||||| || || |||||||| | ||||| | |||| || Sbjct 36083 TATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCG 36024 Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235 ||| || |||||||||||||| | || ||||| |||||||| | || || ||||| Sbjct 36023 TGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCA 35964 Query 43236 CGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || || ||||| ||||||||||| || || || || Sbjct 35963 TGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 35928 >seq63621 Length=23796 Score = 426 bits (472), Expect = 4e-115 Identities = 590/821 (72%), Gaps = 6/821 (1%) Strand=Plus/Minus Query 42454 CTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTA 42513 || || || |||||||| || || |||||| | | |||| | || || || || Sbjct 20774 CTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTA 20715 Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573 ||||| || | ||||||||||| || |||| |||||| | ||||| || || ||| Sbjct 20714 CATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCT 20655 Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACTTGGGACGCGAAT 42631 ||| | || | || | |||||| | | || || ||| | ||| |||| || || | Sbjct 20654 TATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACATGGGTCGTGAGT 20597 Query 42632 GGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTG 42691 |||| ||| | ||| || || ||| | || ||||| |||||| || || || |||| Sbjct 20596 GGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 20537 Query 42692 TGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATG 42751 | || || || || ||||| ||| | |||| ||| |||| ||||| |||||| |||| Sbjct 20536 TTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATG 20477 Query 42752 GAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATA 42811 | |||||||| || || || ||||| ||||| |||||| | || ||||||||||| || | Sbjct 20476 GTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACA 20417 Query 42812 ACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGT 42871 |||| |||||||| || || || ||| | || || || || ||||| || || || | | Sbjct 20416 ACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTAT 20357 Query 42872 TCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACG 42931 || |||||||||||| | || || ||| | | | | ||||| || ||||| | Sbjct 20356 TCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATG 20297 Query 42932 AAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAG 42991 || ||| | || |||| |||||||||||||| || |||||||| || || || | Sbjct 20296 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCG 20237 Query 42992 CGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCT 43050 | |||||||| ||||| || | |||||||||||||| | |||| || || ||| || Sbjct 20236 CTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCG 20178 Query 43051 TTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTC 43110 || |||||||| | || |||||||| || || || || ||||| || || | || || Sbjct 20177 TTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATC 20118 Query 43111 AGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAG 43170 || |||||||| || ||| | |||||||| || || |||||||| | ||||| | |||| Sbjct 20117 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAG 20058 Query 43171 AATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTG 43230 || ||| || |||||||||||||| | || ||||| |||||||| | || || Sbjct 20057 GGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTT 19998 Query 43231 ATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||||| || || ||||| ||||||||||| || || || || Sbjct 19997 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 19957 Score = 284 bits (314), Expect = 3e-72 Identities = 396/552 (72%), Gaps = 6/552 (1%) Strand=Plus/Minus Query 42721 TATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTC 42780 || ||| |||| ||||| |||||| ||||| |||||||| | || || ||||| ||| Sbjct 21474 TAACCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTC 21415 Query 42781 AACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTT 42840 || |||||| | || ||||||||||| || ||||| |||||||| || || || ||| | Sbjct 21414 AATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTA 21355 Query 42841 GGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACC 42900 || || || | ||||| || || || | ||| |||||||||||| | || || Sbjct 21354 GGCGTAGCTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT 21295 Query 42901 TCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGT 42960 ||| | | | | ||||| || ||||| ||| ||| | || |||| || ||| Sbjct 21294 TCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGGT 21235 Query 42961 CAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTC 43020 |||||||| || |||||||| | || || || |||||||| ||||| || | |||||| Sbjct 21234 CAAGAGGAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTC 21175 Query 43021 CAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGT 43079 |||||||| | |||| || || | | || || |||||||| | || |||||||| || Sbjct 21174 CAATATGC-TAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGT 21116 Query 43080 TGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTT 43139 || || || ||||| || || | || |||| ||||||| || ||| | |||||||| Sbjct 21115 AGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT 21056 Query 43140 TAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATAT 43199 || |||||||| | ||||| | ||| || ||| || | |||||||||||| Sbjct 21055 ----TTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATAT 21000 Query 43200 TTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259 | || ||||| |||||||| | || || ||||| || || ||||| |||||||||| Sbjct 20999 CATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCC 20940 Query 43260 GCTTGATCTTGC 43271 || || || || Sbjct 20939 TCTAGACCTAGC 20928 >seq43996 Length=12529 Score = 320 bits (354), Expect = 5e-83 Identities = 576/834 (69%), Gaps = 12/834 (1%) Strand=Plus/Minus Query 42442 TCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAAC 42501 || || ||||| || || || |||||||| || || |||||| | | |||| | Sbjct 1633 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1574 Query 42502 GCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTAC 42561 || || || ||||||| || | ||||||||||| || |||| |||||| | ||| Sbjct 1573 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATAC 1514 Query 42562 AATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACT 42619 || || || |||||| | || | || | |||||| | | || || ||| | ||| Sbjct 1513 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACA 1456 Query 42620 TGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTT 42679 |||| || || ||||| ||| | ||| || || ||| | || ||||| |||||| | Sbjct 1455 TGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCAT 1396 Query 42680 ACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTT 42739 | || || || || || | || | ||||| ||| | |||| ||| | | ||| | Sbjct 1395 ATTCAGCTCCAGTTGCAACTGCTATCGCAGTTTTCTTGATCTACCCAATCGATCAATGAA 1336 Query 42740 CTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCC 42799 |||||| || | || | | | || || || ||||| ||||| |||||| | | |||| Sbjct 1335 GTTTTTCTAATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCC 1276 Query 42800 AGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTG 42859 || | || ||||| |||||||| || || || ||| | || || || || |||||| Sbjct 1275 AG----AGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTA 1220 Query 42860 GTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTG-AA 42918 | || || | || | |||||||||| | || | ||| | ||| | || || Sbjct 1219 GCGGCTCCCTATTAAGTGTTATGCATGGTTCCTTGGTAAGTTCTAGT-TTGATCATGGAA 1161 Query 42919 ACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTAT 42978 || || |||| ||| ||| | || ||||| || ||||||||||| || |||||| Sbjct 1160 ACCACAAAAAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTAT 1101 Query 42979 AACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AA 43037 || || || || || |||||||| ||||| || | |||||||||||||| | |||| || Sbjct 1100 AATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAA 1042 Query 43038 TAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCAC 43097 || ||| || | |||||||| || |||||||| || || || || | ||| || Sbjct 1041 CAACTTTCGTTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTAC 982 Query 43098 TTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACT 43157 || | || |||| |||||||| | ||| | |||||||| || || ||||| || | Sbjct 981 CGCTTTAGGTATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGT 922 Query 43158 TGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCT 43217 ||||||| |||| ||| ||| || |||| ||||||||| | |||||||| ||| | Sbjct 921 AGTTGATAGTCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACAT 862 Query 43218 TGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||| | || || ||||| || || ||||| |||| |||||| || || || || Sbjct 861 TGGTATGGAAGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGC 808 Score = 111 bits (122), Expect = 5e-20 Identities = 169/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 42327 TGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTA 42385 || ||| ||||||||||| ||||||| || | || | | | | | |||| |||| Sbjct 1873 TGATGGATGGTTTGGTGTTTTGATGAT-CCTTACCTTATTGACGGAAACTTCTGTATTTA 1815 Query 42386 TTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTG 42445 || | || ||||||| ||| |||| |||||||||||||| |||| | ||||| | | | Sbjct 1814 TTATTGCCTTCATTGTTGCTCCTCTAGTAGACATTGATGGTATTCATTAACCTATTTTAG 1755 Query 42446 GCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAA 42505 | ||||| || ||||| |||||||| || || |||||| | | |||| | || | Sbjct 1754 GGTCTCTACTTTATGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTA 1695 Query 42506 TTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAA 42563 | || || |||| ||| | || |||||||| | | |||| |||||| | ||||| Sbjct 1694 TAGGTTTATATTTTTATCCAATTTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAA 1637 >seq34978 Length=12172 Score = 156 bits (172), Expect = 1e-33 Identities = 159/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | ||| ||| | ||||||||||| |||| |||||| Sbjct 5464 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 5405 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| |||| || | | | | | |||| |||||| | || ||||| Sbjct 5404 GGTGTTTTGATGAT-CCCTACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCAT 5346 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || || Sbjct 5345 TGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTA 5286 Query 42459 TGGCAACAACATCATCTCTGGTGCC 42483 || |||||||| || || |||||| Sbjct 5285 CGGAAACAACATTATTTCCGGTGCC 5261 >seq1857 Length=125658 Score = 122 bits (134), Expect = 2e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 43072 TGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTG 43131 ||||| || || || || ||||| || || | || |||| |||||||| || ||| | Sbjct 75469 TGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTA 75528 Query 43132 AATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGG 43191 |||||||| || || |||||||| | ||||| | |||| || ||| || |||||| Sbjct 75529 AATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGG 75588 Query 43192 GCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACAT 43251 |||||||| | ||| ||| |||||||| | || || ||||| | || ||||| ||| Sbjct 75589 GCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCAT 75648 Query 43252 AACTTCCCGCTTGATCTTGC 43271 |||||||| || || || || Sbjct 75649 AACTTCCCTCTAGACCTAGC 75668 >seq59810 Length=2273 Score = 118 bits (130), Expect = 3e-22 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 42771 CGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTT 42830 |||||| ||||| || ||| | || ||||||||||| || ||||| |||||||| || || Sbjct 515 CGGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 456 Query 42831 CCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAG 42890 || || | || | || || ||| || || || | ||| |||||||||| | Sbjct 455 TCACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC 396 Query 42891 TCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTA 42950 | || || ||| | | | | |||| || ||||| ||| ||| | || || Sbjct 395 CTTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336 Query 42951 CAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACG 43010 || |||||||||||||| || ||||| || || || || || |||| ||| ||||| || Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276 Query 43011 GCTTATCTTCCAATATGC 43028 | |||||||||||||| Sbjct 275 ATTGATCTTCCAATATGC 258 >seq2280 Length=1098 Score = 105 bits (116), Expect = 2e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 42877 GCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936 |||||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 1082 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 1023 Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996 ||| | || |||| |||| ||||||||| || |||||||| || || || || ||| Sbjct 1022 GCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 963 Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055 ||||| ||||| | | |||||||||||||| | |||| || || ||| || || || Sbjct 962 GGTTATTTTGGCTGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCGTTACA 904 Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCAC 43097 |||||| | | |||||||| || || || || ||||| || Sbjct 903 CTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTTTAC 862 >seq21547 Length=11211 Score = 104 bits (114), Expect = 7e-18 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| | | || ||||||||| | ||| ||| | ||||||||||| |||| |||||| Sbjct 363 TGGGGTTACTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 304 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| |||||| ||||| || | | || | | ||| |||||| | || ||||| Sbjct 303 GGTGTTTTGATGA-TCCCTACCTTATTGATGGCAACTTTTGTATTTATTATTGCCTTCAT 245 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATT 42429 |||||| ||||| |||||||||||||| ||| Sbjct 244 TGCTGCTCCTCCAGTAGACATTGATGGTATT 214 >seq1272 Length=458668 Score = 100 bits (110), Expect = 8e-17 Identities = 206/299 (69%), Gaps = 7/299 (2%) Strand=Plus/Minus Query 42772 GGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTC 42831 ||||| ||||| |||||| | || ||||||||||| || ||||| |||||||| || || Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353 Query 42832 CATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGT 42891 || || | || | || | ||| || || || | ||| |||||||||| | Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTCC 207293 Query 42892 CTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA--AGC-CAAAATTATGGC 42948 | || || ||| | | | | |||| || ||||| ||| || ||| | || Sbjct 207292 TTGGTAACTTCTAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGGT 207233 Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008 || | || ||||||||||| || |||| || || || || || |||| ||| ||||| Sbjct 207232 TAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGGC 207173 Query 43009 CGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTT-TCTT 43065 || | |||||||||||||| | |||| || || ||| || || ||| |||| |||| Sbjct 207172 CGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTC-TTACACATCTTCTCTT 207116 >seq17562 Length=33771 Score = 95.1 bits (104), Expect = 3e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 42787 ATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTT 42846 ||| | || ||||||||||| || ||||| |||||||| || || || || | || | Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256 Query 42847 GCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCT 42906 || || ||| || || || | ||| |||||||||| | | || || ||| | Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCCTTGGTAACTTCTAGT 25196 Query 42907 CTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAG 42966 | | | |||| || ||||| ||| ||| | || |||| ||| |||||||| Sbjct 25195 TTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGAG 25136 Query 42967 GAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATAT 43026 || || ||||| || || || || | |||| ||| ||||| || | |||||||||||| Sbjct 25135 GAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATAT 25076 Query 43027 GC 43028 || Sbjct 25075 GC 25074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143424287767872