Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 542 8e-150
seq63621 426 4e-115
seq43996 320 5e-83
seq34978 156 1e-33
seq1857 122 2e-23
seq59810 118 3e-22
seq2280 105 2e-18
seq21547 104 7e-18
seq1272 100 8e-17
seq17562 95.1 3e-15
>seq4583
Length=37858
Score = 542 bits (600), Expect = 8e-150
Identities = 722/996 (72%), Gaps = 8/996 (1%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | ||| ||| | ||||||||||| |||| ||||||
Sbjct 36919 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 36860
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398
||||| ||||||| |||| || | | | | | |||| ||| || | || |||||
Sbjct 36859 GGTGTTTTGATGAT-CCCTACCTTATTGACGGCAACTTCTGTATTTGTTATTGCCTTCAT 36801
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
|||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||
Sbjct 36800 TGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTA 36741
Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518
| |||||||| || | |||||| | | |||| | || || || |||||||
Sbjct 36740 CGAAAACAACATTATTTTCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACATTT 36681
Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578
|| | ||||||||||| || |||| |||||| | ||||| || || |||||| |
Sbjct 36680 TTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 36621
Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACTTGGGACGCGAATGGGAA 42636
|| | || | |||||| | | || || ||| | ||| |||| || || |||||
Sbjct 36620 ACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACATGGGTCGTGAGTGGGAG 36563
Query 42637 CTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCT 42696
||| | ||| || || ||| | || ||||| |||||| || || || ||||| ||
Sbjct 36562 CTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCA 36503
Query 42697 GCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATG 42756
|| || || ||||| ||| | |||| ||| |||| ||||| |||||| ||||| |||
Sbjct 36502 GCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATG 36443
Query 42757 CCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATT 42816
||||| || || || ||||| ||||| |||||| | || ||||||||||| || |||||
Sbjct 36442 CCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATC 36383
Query 42817 CTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCA 42876
|||||||| || || || ||| | || || || || ||||| || || || | |||
Sbjct 36382 CTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGT 36323
Query 42877 GCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936
|||||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 36322 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 36263
Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996
||| | || |||| |||||||||||||| || |||||||| || || || || |||
Sbjct 36262 GCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 36203
Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055
||||| ||||| || | |||||||||||||| | |||| || || ||| || || ||
Sbjct 36202 GGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCGTTACA 36144
Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTAC 43115
|||||| | || |||||||| || || || || ||||| || || | || |||| ||
Sbjct 36143 CTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCAC 36084
Query 43116 TATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCA 43175
|||||| || ||| | |||||||| || || |||||||| | ||||| | |||| ||
Sbjct 36083 TATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCG 36024
Query 43176 TGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCA 43235
||| || |||||||||||||| | || ||||| |||||||| | || || |||||
Sbjct 36023 TGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCA 35964
Query 43236 CGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
|| || ||||| ||||||||||| || || || ||
Sbjct 35963 TGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 35928
>seq63621
Length=23796
Score = 426 bits (472), Expect = 4e-115
Identities = 590/821 (72%), Gaps = 6/821 (1%)
Strand=Plus/Minus
Query 42454 CTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTA 42513
|| || || |||||||| || || |||||| | | |||| | || || || ||
Sbjct 20774 CTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTA 20715
Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573
||||| || | ||||||||||| || |||| |||||| | ||||| || || |||
Sbjct 20714 CATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCT 20655
Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACTTGGGACGCGAAT 42631
||| | || | || | |||||| | | || || ||| | ||| |||| || || |
Sbjct 20654 TATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACATGGGTCGTGAGT 20597
Query 42632 GGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTG 42691
|||| ||| | ||| || || ||| | || ||||| |||||| || || || ||||
Sbjct 20596 GGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 20537
Query 42692 TGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATG 42751
| || || || || ||||| ||| | |||| ||| |||| ||||| |||||| ||||
Sbjct 20536 TTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATG 20477
Query 42752 GAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATA 42811
| |||||||| || || || ||||| ||||| |||||| | || ||||||||||| || |
Sbjct 20476 GTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACA 20417
Query 42812 ACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGT 42871
|||| |||||||| || || || ||| | || || || || ||||| || || || | |
Sbjct 20416 ACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTAT 20357
Query 42872 TCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACG 42931
|| |||||||||||| | || || ||| | | | | ||||| || ||||| |
Sbjct 20356 TCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATG 20297
Query 42932 AAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAG 42991
|| ||| | || |||| |||||||||||||| || |||||||| || || || |
Sbjct 20296 AATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCG 20237
Query 42992 CGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCT 43050
| |||||||| ||||| || | |||||||||||||| | |||| || || ||| ||
Sbjct 20236 CTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCG 20178
Query 43051 TTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTC 43110
|| |||||||| | || |||||||| || || || || ||||| || || | || ||
Sbjct 20177 TTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATC 20118
Query 43111 AGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAG 43170
|| |||||||| || ||| | |||||||| || || |||||||| | ||||| | ||||
Sbjct 20117 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAG 20058
Query 43171 AATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTG 43230
|| ||| || |||||||||||||| | || ||||| |||||||| | || ||
Sbjct 20057 GGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTT 19998
Query 43231 ATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
||||| || || ||||| ||||||||||| || || || ||
Sbjct 19997 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 19957
Score = 284 bits (314), Expect = 3e-72
Identities = 396/552 (72%), Gaps = 6/552 (1%)
Strand=Plus/Minus
Query 42721 TATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTC 42780
|| ||| |||| ||||| |||||| ||||| |||||||| | || || ||||| |||
Sbjct 21474 TAACCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTC 21415
Query 42781 AACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTT 42840
|| |||||| | || ||||||||||| || ||||| |||||||| || || || ||| |
Sbjct 21414 AATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTA 21355
Query 42841 GGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACC 42900
|| || || | ||||| || || || | ||| |||||||||||| | || ||
Sbjct 21354 GGCGTAGCTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT 21295
Query 42901 TCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGT 42960
||| | | | | ||||| || ||||| ||| ||| | || |||| || |||
Sbjct 21294 TCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGGT 21235
Query 42961 CAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTC 43020
|||||||| || |||||||| | || || || |||||||| ||||| || | ||||||
Sbjct 21234 CAAGAGGAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTC 21175
Query 43021 CAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGT 43079
|||||||| | |||| || || | | || || |||||||| | || |||||||| ||
Sbjct 21174 CAATATGC-TAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGT 21116
Query 43080 TGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTT 43139
|| || || ||||| || || | || |||| ||||||| || ||| | ||||||||
Sbjct 21115 AGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT 21056
Query 43140 TAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATAT 43199
|| |||||||| | ||||| | ||| || ||| || | ||||||||||||
Sbjct 21055 ----TTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATAT 21000
Query 43200 TTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259
| || ||||| |||||||| | || || ||||| || || ||||| ||||||||||
Sbjct 20999 CATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCC 20940
Query 43260 GCTTGATCTTGC 43271
|| || || ||
Sbjct 20939 TCTAGACCTAGC 20928
>seq43996
Length=12529
Score = 320 bits (354), Expect = 5e-83
Identities = 576/834 (69%), Gaps = 12/834 (1%)
Strand=Plus/Minus
Query 42442 TCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAAC 42501
|| || ||||| || || || |||||||| || || |||||| | | |||| |
Sbjct 1633 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1574
Query 42502 GCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTAC 42561
|| || || ||||||| || | ||||||||||| || |||| |||||| | |||
Sbjct 1573 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATAC 1514
Query 42562 AATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGG--TATCTTCTCTTACT 42619
|| || || |||||| | || | || | |||||| | | || || ||| | |||
Sbjct 1513 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGT--TACA 1456
Query 42620 TGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTT 42679
|||| || || ||||| ||| | ||| || || ||| | || ||||| |||||| |
Sbjct 1455 TGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCAT 1396
Query 42680 ACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTT 42739
| || || || || || | || | ||||| ||| | |||| ||| | | ||| |
Sbjct 1395 ATTCAGCTCCAGTTGCAACTGCTATCGCAGTTTTCTTGATCTACCCAATCGATCAATGAA 1336
Query 42740 CTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCC 42799
|||||| || | || | | | || || || ||||| ||||| |||||| | | ||||
Sbjct 1335 GTTTTTCTAATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCC 1276
Query 42800 AGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTG 42859
|| | || ||||| |||||||| || || || ||| | || || || || ||||||
Sbjct 1275 AG----AGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTA 1220
Query 42860 GTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTG-AA 42918
| || || | || | |||||||||| | || | ||| | ||| | || ||
Sbjct 1219 GCGGCTCCCTATTAAGTGTTATGCATGGTTCCTTGGTAAGTTCTAGT-TTGATCATGGAA 1161
Query 42919 ACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTAT 42978
|| || |||| ||| ||| | || ||||| || ||||||||||| || ||||||
Sbjct 1160 ACCACAAAAAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTAT 1101
Query 42979 AACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AA 43037
|| || || || || |||||||| ||||| || | |||||||||||||| | |||| ||
Sbjct 1100 AATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAA 1042
Query 43038 TAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCAC 43097
|| ||| || | |||||||| || |||||||| || || || || | ||| ||
Sbjct 1041 CAACTTTCGTTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTAC 982
Query 43098 TTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACT 43157
|| | || |||| |||||||| | ||| | |||||||| || || ||||| || |
Sbjct 981 CGCTTTAGGTATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGT 922
Query 43158 TGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCT 43217
||||||| |||| ||| ||| || |||| ||||||||| | |||||||| ||| |
Sbjct 921 AGTTGATAGTCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACAT 862
Query 43218 TGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271
||| | || || ||||| || || ||||| |||| |||||| || || || ||
Sbjct 861 TGGTATGGAAGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGC 808
Score = 111 bits (122), Expect = 5e-20
Identities = 169/238 (71%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 42327 TGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTA 42385
|| ||| ||||||||||| ||||||| || | || | | | | | |||| ||||
Sbjct 1873 TGATGGATGGTTTGGTGTTTTGATGAT-CCTTACCTTATTGACGGAAACTTCTGTATTTA 1815
Query 42386 TTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTG 42445
|| | || ||||||| ||| |||| |||||||||||||| |||| | ||||| | | |
Sbjct 1814 TTATTGCCTTCATTGTTGCTCCTCTAGTAGACATTGATGGTATTCATTAACCTATTTTAG 1755
Query 42446 GCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAA 42505
| ||||| || ||||| |||||||| || || |||||| | | |||| | || |
Sbjct 1754 GGTCTCTACTTTATGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTA 1695
Query 42506 TTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAA 42563
| || || |||| ||| | || |||||||| | | |||| |||||| | |||||
Sbjct 1694 TAGGTTTATATTTTTATCCAATTTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAA 1637
>seq34978
Length=12172
Score = 156 bits (172), Expect = 1e-33
Identities = 159/205 (78%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| || || ||||||||| | ||| ||| | ||||||||||| |||| ||||||
Sbjct 5464 TGGGGTCGCTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 5405
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398
||||| ||||||| |||| || | | | | | |||| |||||| | || |||||
Sbjct 5404 GGTGTTTTGATGAT-CCCTACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCAT 5346
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458
|||||| ||||| |||||||||||||| |||||||||||||| || || ||||| || ||
Sbjct 5345 TGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTA 5286
Query 42459 TGGCAACAACATCATCTCTGGTGCC 42483
|| |||||||| || || ||||||
Sbjct 5285 CGGAAACAACATTATTTCCGGTGCC 5261
>seq1857
Length=125658
Score = 122 bits (134), Expect = 2e-23
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 43072 TGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTG 43131
||||| || || || || ||||| || || | || |||| |||||||| || ||| |
Sbjct 75469 TGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTA 75528
Query 43132 AATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTGG 43191
|||||||| || || |||||||| | ||||| | |||| || ||| || ||||||
Sbjct 75529 AATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGG 75588
Query 43192 GCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACAT 43251
|||||||| | ||| ||| |||||||| | || || ||||| | || ||||| |||
Sbjct 75589 GCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCAT 75648
Query 43252 AACTTCCCGCTTGATCTTGC 43271
|||||||| || || || ||
Sbjct 75649 AACTTCCCTCTAGACCTAGC 75668
>seq59810
Length=2273
Score = 118 bits (130), Expect = 3e-22
Identities = 181/258 (70%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 42771 CGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTT 42830
|||||| ||||| || ||| | || ||||||||||| || ||||| |||||||| || ||
Sbjct 515 CGGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 456
Query 42831 CCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAG 42890
|| || | || | || || ||| || || || | ||| |||||||||| |
Sbjct 455 TCACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC 396
Query 42891 TCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTA 42950
| || || ||| | | | | |||| || ||||| ||| ||| | || ||
Sbjct 395 CTTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336
Query 42951 CAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACG 43010
|| |||||||||||||| || ||||| || || || || || |||| ||| ||||| ||
Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276
Query 43011 GCTTATCTTCCAATATGC 43028
| ||||||||||||||
Sbjct 275 ATTGATCTTCCAATATGC 258
>seq2280
Length=1098
Score = 105 bits (116), Expect = 2e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 42877 GCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGC 42936
|||||||||||| | || || ||| | | | | ||||| || ||||| |||
Sbjct 1082 GCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCT 1023
Query 42937 CAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCAT 42996
||| | || |||| |||| ||||||||| || |||||||| || || || || |||
Sbjct 1022 GCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCAT 963
Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCA 43055
||||| ||||| | | |||||||||||||| | |||| || || ||| || || ||
Sbjct 962 GGTTATTTTGGCTGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCGTTACA 904
Query 43056 CTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCAC 43097
|||||| | | |||||||| || || || || ||||| ||
Sbjct 903 CTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTTTAC 862
>seq21547
Length=11211
Score = 104 bits (114), Expect = 7e-18
Identities = 115/151 (76%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339
|||| | | || ||||||||| | ||| ||| | ||||||||||| |||| ||||||
Sbjct 363 TGGGGTTACTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTT 304
Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398
||||| |||||| ||||| || | | || | | ||| |||||| | || |||||
Sbjct 303 GGTGTTTTGATGA-TCCCTACCTTATTGATGGCAACTTTTGTATTTATTATTGCCTTCAT 245
Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATT 42429
|||||| ||||| |||||||||||||| |||
Sbjct 244 TGCTGCTCCTCCAGTAGACATTGATGGTATT 214
>seq1272
Length=458668
Score = 100 bits (110), Expect = 8e-17
Identities = 206/299 (69%), Gaps = 7/299 (2%)
Strand=Plus/Minus
Query 42772 GGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTC 42831
||||| ||||| |||||| | || ||||||||||| || ||||| |||||||| || ||
Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353
Query 42832 CATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGT 42891
|| || | || | || | ||| || || || | ||| |||||||||| |
Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTCC 207293
Query 42892 CTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA--AGC-CAAAATTATGGC 42948
| || || ||| | | | | |||| || ||||| ||| || ||| | ||
Sbjct 207292 TTGGTAACTTCTAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGGT 207233
Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008
|| | || ||||||||||| || |||| || || || || || |||| ||| |||||
Sbjct 207232 TAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGGC 207173
Query 43009 CGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTT-TCTT 43065
|| | |||||||||||||| | |||| || || ||| || || ||| |||| ||||
Sbjct 207172 CGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTC-TTACACATCTTCTCTT 207116
>seq17562
Length=33771
Score = 95.1 bits (104), Expect = 3e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 42787 ATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTT 42846
||| | || ||||||||||| || ||||| |||||||| || || || || | || |
Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256
Query 42847 GCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCT 42906
|| || ||| || || || | ||| |||||||||| | | || || ||| |
Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCCTTGGTAACTTCTAGT 25196
Query 42907 CTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAG 42966
| | | |||| || ||||| ||| ||| | || |||| ||| ||||||||
Sbjct 25195 TTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGAG 25136
Query 42967 GAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATAT 43026
|| || ||||| || || || || | |||| ||| ||||| || | ||||||||||||
Sbjct 25135 GAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATAT 25076
Query 43027 GC 43028
||
Sbjct 25075 GC 25074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143424287767872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |