Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_021348.1 Length=156558 Score E Sequences producing significant alignments: (Bits) Value seq61823 104 2e-17 >seq61823 Length=3776 Score = 104 bits (114), Expect = 2e-17 Identities = 115/150 (77%), Gaps = 10/150 (7%) Strand=Plus/Plus Query 114585 CGGCCCGGGCCGTGGCTC---TGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCAC 114641 ||||||||| ||||| || ||||||| ||| |||| | |||| ||| ||||||| Sbjct 1488 CGGCCCGGGTCGTGGTTCCGGTGCCGGT---TCGATGGTGGCGTACGCGATGCGCATCAC 1544 Query 114642 CTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGC-- 114699 | ||||||||||| | ||| ||||| |||||||| || |||||||||||||| Sbjct 1545 CGACCTCGACCCGATCCGGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCGGACCGCGT 1604 Query 114700 CCCGACTTCCCCGACATCGACGTCGACTTC 114729 | ||| | |||||| |||||||||||||| Sbjct 1605 CTCGA--TGCCCGACTTCGACGTCGACTTC 1632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500459017521920