Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_022069.1
Length=55213
Score E
Sequences producing significant alignments: (Bits) Value
seq63378 80.6 9e-11
>seq63378
Length=15302
Score = 80.6 bits (88), Expect = 9e-11
Identities = 122/172 (71%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 10406 TCGCTCGACGATATGGGTTCGATCTTCAACAAG--GTCCAAACCAACGGTAAAGCGATGA 10463
||||||||||| ||||| |||||| |||||||| | ||| ||| ||| || | |
Sbjct 11820 TCGCTCGACGAGATGGGCTCGATCATCAACAAGACGACCA--CCAGCGGCAAGGTCTACA 11877
Query 10464 CTGACGATCTGCAGATGCTCGCCGATCGTGGGTTGCCGATCTTCACGTGGCTGCAGAAGC 10523
| ||| | || | |||||| || || || | ||||||||| |||||||||||||
Sbjct 11878 CGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGG 11937
Query 10524 AGTACGGGGTGACCGGTGAGGCGCTGCAGAAGATGGTTTCTGACGGCAAGGT 10575
||||||| || ||| || ||| | |||||| || | ||||||||
Sbjct 11938 AGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGT 11989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 176426518874400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |