Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_022069.1 Length=55213 Score E Sequences producing significant alignments: (Bits) Value seq63378 80.6 9e-11 >seq63378 Length=15302 Score = 80.6 bits (88), Expect = 9e-11 Identities = 122/172 (71%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 10406 TCGCTCGACGATATGGGTTCGATCTTCAACAAG--GTCCAAACCAACGGTAAAGCGATGA 10463 ||||||||||| ||||| |||||| |||||||| | ||| ||| ||| || | | Sbjct 11820 TCGCTCGACGAGATGGGCTCGATCATCAACAAGACGACCA--CCAGCGGCAAGGTCTACA 11877 Query 10464 CTGACGATCTGCAGATGCTCGCCGATCGTGGGTTGCCGATCTTCACGTGGCTGCAGAAGC 10523 | ||| | || | |||||| || || || | ||||||||| ||||||||||||| Sbjct 11878 CGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGG 11937 Query 10524 AGTACGGGGTGACCGGTGAGGCGCTGCAGAAGATGGTTTCTGACGGCAAGGT 10575 ||||||| || ||| || ||| | |||||| || | |||||||| Sbjct 11938 AGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGT 11989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176426518874400