Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_022071.1 Length=76129 Score E Sequences producing significant alignments: (Bits) Value seq62752 172 3e-38 >seq62752 Length=6345 Score = 172 bits (190), Expect = 3e-38 Identities = 433/650 (67%), Gaps = 15/650 (2%) Strand=Plus/Minus Query 50742 GACCACATTCGCCAGTTGCATCGGCTGGGGTTCCTGCCGCTGCGGTTCTGCGCGGTGCCT 50801 |||||| | ||| |||| || ||||| | ||||||||| | || ||||| |||| Sbjct 2866 GACCACGTCCGCGCCCTGCACCGCCTGGGCTACCTGCCGCTCGAGATCCGCGCGCTGCCC 2807 Query 50802 GAGGGGACGCTAGTGCCTATCGGGGTTCCATCGTTCACGGTGGAGAACACTCACGAGTCG 50861 ||||| || || | || ||||| || | | | ||||| |||||||| ||| | Sbjct 2806 GAGGGCACCCTCGCTCCGATCGGCGTCGCCACCCTGACGGTCGAGAACACCGTCGACGAG 2747 Query 50862 TTCTACTGGCTGACCAACTACATCGAGACCGGCCTGAGCGCCGGGGTGTGGCAGGCCAGC 50921 |||| ||||||| | |||||||||||||||| ||| || | | ||||| || Sbjct 2746 TTCTTCTGGCTGCCGAACTACATCGAGACCGCACTGTCTGCGTCGATCTGGCACCCCTCG 2687 Query 50922 ACCAGCGCGACCATCGCTAAGCAGTACCGGCGGGTGCTTGAGGCCGCGGCCTTGCGGACC 50981 || ||| || | || ||||||| | | |||| | |||| || ||| Sbjct 2686 ACGGTCGCCACGAAGGCGCTCGAGTACCGCGACCTCATGGAGGACTGGGCCGCCCGCACC 2627 Query 50982 GGCTCGGACCTGGCGGGCGTCGACTG-GCAGTGCCATGACTTCTCTTACCG-GGGCATGT 51039 || | || | ||| || |||||| || | ||| |||||||| | ||| ||||| || Sbjct 2626 GGTGCAGATCCCGCGAGCATCGACTTCGCCGC-CCACGACTTCTCGTTCCGCGGGCA-GT 2569 Query 51040 CCTCGCAT-GAGAGCGCGGCGGCGTCGGGCGCGGCGCACCTGCTGAGCTTCACCGGTACG 51098 | |||| ||| || |||||| || || | |||||||| ||| ||| || Sbjct 2568 CGA-GCATCGAGTCGGCCGCGGCGGGCGGTGCCGGACACCTGCTCTCGTTCCTCGGCACC 2510 Query 51099 GACTCGCTGGTCTCACTCGATTGGATCGACCGCTACTACGGCGGCGATTAC------GTC 51152 |||||| || ||| ||||| | ||||||||||||||| |||||| || || Sbjct 2509 GACTCGATGCCCTCCCTCGACTTCATCGACCGCTACTACCCCGGCGACAACGGCTGGGTG 2450 Query 51153 GCGGGGTCGGTCCCGGCTACCGAGCACTCGGTGATGTGTACCGGCATTGAGACGGTCGGG 51212 |||| | ||||| || ||||||||| || ||||| || | | | | ||| Sbjct 2449 GCGGCGAGCGTCCCCGCGACCGAGCACAGCGTCATGTG---CGTCCGCGGCGCCGACGGC 2393 Query 51213 GAGCTTGAGACGTTTAGGCGGCTGCTGGACCTGTACCCGACCGGCATCGTTAGCGTCGTT 51272 ||||| ||||| || || | | || ||| |||||||||| |||||||| | || Sbjct 2392 GAGCTGGAGACCTTCGCGCAGATCCTCGACGTGTACCCGACGGGCATCGTCTCGGCGGTG 2333 Query 51273 AGCGACACGTTCGACCTGTGGAAGGTGCTAACCACGTACCTGCCGACGCTGTATAAGCAG 51332 |||||| |||||||||| ||||| || ||| | || ||| ||| | | | Sbjct 2332 AGCGACGGCTTCGACCTGTTCAAGGTCCTCACCGAGACGCTCCCGCAGCTCAAGGACCGC 2273 Query 51333 ATCGTGGGCCGGGACGGGAAGCTGGTCATTCGGCCTGACTCCGGCGATCC 51382 ||| | ||| ||||| ||||| ||||| || || ||||| ||||| || Sbjct 2272 ATCACCGCCCGCGACGGCAAGCTCGTCATCCGTCCGGACTCGGGCGACCC 2223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243299076443360