Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq63210 342 2e-89 >seq63210 Length=11074 Score = 342 bits (378), Expect = 2e-89 Identities = 537/763 (70%), Gaps = 28/763 (4%) Strand=Plus/Plus Query 56159 TGGCGTGAGCAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGAT 56218 ||||| | |||||||| || ||||| || ||||| ||||||||| | | |||||| Sbjct 7136 TGGCGGAACCAGCTCGGGACGCTCGGGTCGGGCAACCACTTCATCGAGGTCTCCCTCGAC 7195 Query 56219 CACCTTGACCGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATC 56278 | | |||| ||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct 7196 GAGCAGGACCAGGTCTGGCTGTTCCTGCACTCCGGGTCACGCGGCGTCGGCAACAAGATC 7255 Query 56279 GCCCAGCGGCATATCTCTGCGGCGCAG--GGGTATTGCCAGGCGCAAGGGCTGCACGTCC 56336 ||||||||||| ||| | ||| || || || | || | || | | | | Sbjct 7256 GCCCAGCGGCACATCACGATCGCGAAGAAGGCGATGGAGCGGTGGT--GGATCGAGCTGC 7313 Query 56337 CGCACCGCGACCTCGCGTACCTCGTCGAGGGCACTGTCGAGTTCGACCGCTACCTCGTCG 56396 || ||| |||||| |||||||||||||||||||| |||||||||||| ||| ||| || Sbjct 7314 CGGACCCCGACCTGGCGTACCTCGTCGAGGGCACGCCCGAGTTCGACCGGTACATCGCCG 7373 Query 56397 AGCTGCGGTGGGCGCAGCGGTTCGCGTACTACAACCGCGCCGAGATGATGGACCGTTTCG 56456 |||||||||||||||||| |||||| | |||||||| |||||||||||||| ||| Sbjct 7374 AGCTGCGGTGGGCGCAGCACTTCGCGCTCCTCAACCGCGAGGAGATGATGGACCGGGTCG 7433 Query 56457 CGCAGGCGTTCCGGCATTGGATCGGCGCC---GACGCCCCGATCGACGAGCTGGTCGTCG 56513 ||||||| | || | | ||||| || |||| ||||| || Sbjct 7434 ---------TCCGGCAGCTGCGCGAGGTCATGGACGCGCCCGTCGAGGAGCT------CG 7478 Query 56514 AGACGATCAACACGCATCACAACTACACGCAGAAGGAGCTGCAC-GGCGGCCGTGAGGTG 56572 || |||||| || ||||||| ||||||| ||| |||| || || || | || Sbjct 7479 AGCGAATCAACTGCCACCACAACTTCACGCAGCGCGAGACGCACTGGGGGAAGTCCG-TG 7537 Query 56573 TGGTTGACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCCTGATTCCCGGC 56632 ||| || |||| ||||| |||||| | ||| | | ||| | |||||||| ||||| Sbjct 7538 TGGGTGTCCCGGAAGGGCGCGATCCAGGCGAAGGCGGGGCAGGCCGGCCTGATCCCCGGG 7597 Query 56633 AGCATGGGCACTTGCTCGTATGTCGTGACGGGCAAGGGCAATCCCGAGGCGCTGCATTCT 56692 |||||||| ||||| ||||| |||| ||||| | |||| | || Sbjct 7598 TCGATGGGCACCGCGTCGTACGTCGTCGAGGGCCTCGGCAACAAGCCGTCGCTCGAGTCG 7657 Query 56693 GCGCCGCACGGCGCCGGTCGCCGGTTCTCGCGCGCCAAGGCCCGAAAGCTGTTCACGGTC 56752 |||||||||| ||||| || | || |||||| | ||| || | ||||||| | Sbjct 7658 TCGCCGCACGGTGCCGGGCGGCTGTACTCGCGGTCGGCGGCACGGCGGACGTTCACGCAC 7717 Query 56753 GACGACCTC--GCCGACCGTATGCAGGGCATCGAGTACCGGCACGGCGAGGCGTGGGTCG 56810 ||||| ||| | || || ||| |||||||||||||| || ||| |||| ||| Sbjct 7718 GACGAGCTCCGGGCGGCC--ATGGTCGGCATCGAGTACCGCGACACCGACGCGTTCCTCG 7775 Query 56811 ATGAGATTCCCGACGCCTACAAGCCGATTGACGTCGTGATGGCCGACGCCGACAGCCTGG 56870 | ||||| || | || ||||||||||| ||| |||||||| ||||||| | ||| | Sbjct 7776 ACGAGATCCCGGCGGCGTACAAGCCGATCGACCAGGTGATGGCGGACGCCGCCGACCTCG 7835 Query 56871 TGACGATCGACGCCGAGCTGCGCCAGGTGCTCAACGTCAAGGG 56913 || ||||| | |||||| ||| | ||||||| ||||| Sbjct 7836 TGTCGATCCGGCACACGCTGCGGCAGATCGTCAACGTGAAGGG 7878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199611400251408