Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq45924 80.6 7e-11 >seq45924 Length=9929 Score = 80.6 bits (88), Expect = 7e-11 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 30744 CTGCACGCAGACCGACCCCGAGGTGTTCTTTCCCGAGAAAGGCGAACCCGTTGGCCCCGC 30803 |||| |||||||||||||||||| |||||| |||||||| |||| || || || Sbjct 5567 CTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGCTCCACCCGCGAGGC 5508 Query 30804 GCGCAATATCTGCAGGCGGTGCGAAGTGCAGGCGAAGTGCCTGGAGGTTGCACTCGCCCG 30863 | || ||||||| |||||| || | | || ||||||| ||| ||||||| Sbjct 5507 GAAGAAGATCTGCACCTCGTGCGAGGTCCGGTCGCAGTGCCTCGAGTACGCACTCGAGAA 5448 Query 30864 CGAAGAAGAGTTCGGCATCTGGGGCGG 30890 ||| || |||||||||||||| || Sbjct 5447 CGACGAGCGCTTCGGCATCTGGGGTGG 5421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134944303571136