Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023601.1 Length=97906 Score E Sequences producing significant alignments: (Bits) Value seq62752 86.0 4e-12 >seq62752 Length=6345 Score = 86.0 bits (94), Expect = 4e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 12178 AGACAGCGGAGTTTCGTGGTAGTTCACCAACCAGAAGAAGTCATCCAGAGTGTTGGTGAT 12237 |||||| | || ||| ||||||| || ||||||||| || || | ||||| || Sbjct 2708 AGACAGTGCGGTCTCGATGTAGTTCGGCAGCCAGAAGAACTCGTCGACGGTGTTCTCGAC 2767 Query 12238 GGTCAGGACAGGAATACCCATCGGAACCAGCGTACCTTCTGGCAGGGAGCGGAACTCCAG 12297 |||||| | | || |||||| | || || || || ||||| | ||||| ||| || Sbjct 2768 CGTCAGGGTGGCGACGCCGATCGGAGCGAGGGTGCCCTCGGGCAGCGCGCGGATCTCGAG 2827 Query 12298 CGGCAGGTAGCCCAGATCGTGCAGGGC 12324 ||||||||||||||| ||||||||| Sbjct 2828 CGGCAGGTAGCCCAGGCGGTGCAGGGC 2854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 312931406417168