Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023692.1 Length=48984 Score E Sequences producing significant alignments: (Bits) Value seq63531 98.7 3e-16 >seq63531 Length=42858 Score = 98.7 bits (108), Expect = 3e-16 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 36875 GAGCAGCTCCGCACGGCGATCGAGCTCGTCGTGACAACACAGTTCGCCTCGGGCACGATG 36934 |||| ||| | | ||||| |||| | ||||| | || ||||||| ||| | ||||| Sbjct 25711 GAGCTGCTGCTCGCGGCGGTCGAACAGGTCGTCTCGACGCAGTTCGGGTCGACCTCGATG 25652 Query 36935 CTGCAACGCAAGCTCAACGTCGGGTTCGCCCGGTCGCAACGCCTGCTCGACGAGATGGAG 36994 || || || |||||| |||||||||||| | | ||||||| | ||| ||||||| Sbjct 25651 CTCCAGCGGAAGCTCCGCGTCGGGTTCGCGAAGGCCGGACGCCTGATGGACCTGATGGAG 25592 Query 36995 CAACTCGGCATCGTCGGCGAGGCTGAGGGCAGCAAGGCGCGCCCGGTCTACTTCAAGGCC 37054 | || |||||||||| | | ||||| ||||||||| ||| | ||| ||| Sbjct 25591 TCCCGCGACATCGTCGGCCCGTCCGAGGGTTCGAAGGCGCGCGACGTCCTCGTCACGGCG 25532 Query 37055 GACGACCTCGCCG-GGGCGCTGGCGCTGCTCGGGGGCGACGAG 37096 ||| | || |||| || ||| ||| ||| ||||||| ||| Sbjct 25531 GACCAGCT-GCCGTCGGTGCTCGCGAAGCTGCGGGGCGAGGAG 25490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156508788270528