Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023722.1 Length=59231 Score E Sequences producing significant alignments: (Bits) Value seq63378 136 1e-27 >seq63378 Length=15302 Score = 136 bits (150), Expect = 1e-27 Identities = 357/539 (66%), Gaps = 8/539 (1%) Strand=Plus/Plus Query 21106 AAGGGCCTGGACCGACTGACCGCGATCGACAACGCGAAGGCCAAGCTGTCCGGCCTG--G 21163 |||||| | | |||||| || |||||| ||||||||| |||||| ||||||| | Sbjct 11577 AAGGGCATCGCCCGACTCCTCGACATCGACGACGCGAAGGGCAAGCTCGCCGGCCTCAAG 11636 Query 21164 GCCACGAGGCGGGCACTGTCCAGCAGATCATGGACAACGCGATGAACTCGGTGAAGGGCA 21223 | ||| | || || || | ||||||||||| ||| || | || || || | Sbjct 11637 ACGTCGACGAAGG-ACA-TCGCGTCGATCATGGACAGCGCCCTGCAGTCCGTCCGCGGGA 11694 Query 21224 CCGCATACGGTCTCGGCGACGCTGCCTCCGTCGCGGCCGGCGCTGTCGCTGCGGGTATCA 21283 |||| | ||||||||||||||| || ||| || | ||| ||||| || ||||||| Sbjct 11695 CCGCCTTCGGTCTCGGCGACGCAGCTGGCGTTGCATCGAACGCCGTCGCCGCCGGTATCA 11754 Query 21284 AGCCGGGC--GCCGAACTCGAACGGACCCTGAAGGTCATCGGTGACTCCGCGTCGATCGC 21341 |||| ||| | || | |||| | ||| ||| ||| || ||| | || | ||||| Sbjct 11755 AGCCCGGCCAGGCGCTCACGAA--GTACCTCAAGCTCACCGCCGACGCGGCCACCATCGC 11812 Query 21342 GGGTGTCGAACTCGGTGACATGGGCGCGATCTTCAACAAGGTCGCCGCGTCGAACAAGAT 21401 |||||| |||| || |||||| ||||| |||||||| || | |||| | Sbjct 11813 TGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAAGACGACCACCAGCGGCAAGGT 11872 Query 21402 CCAGGGCGACGTCATCGCCCAGCTCTCCGACGCCGGTATCCCGGTCGTCCAGTTGCTCGG 21461 | | ||| | || ||||||| | ||| || |||||| || |||||| ||| Sbjct 11873 CTACACGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCA 11932 Query 21462 GAAGGAACTGGGCAAGACCTCGGAGGAGGTCCTGGCCCTGGCCTCGGAGGGCAAGATCAA 21521 |||||| ||| || | || || || | | ||| |||| |||||||| || | Sbjct 11933 GAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGTCGA 11992 Query 21522 CTTCGAGACCTTCCAGAACGCGATGGAGAAGGGCATGGGTGGGGCCGCGCTGAAGGCGGG 21581 || | ||||||| || | || ||| || ||| || || || || || | || Sbjct 11993 CTCGGCCACCTTCCGCAAGGTCATCGAGGAGAACATCGGCGGCGCGGCCCTCGCTTCCGG 12052 Query 21582 CGACACCTTCAAGGGCGCGGTGGACAACGCCGGCGCCGCGCTGGGCCGTCTCGGTGCCA 21640 | | ||| || |||||| || |||| ||| || | || ||||| ||||| |||| Sbjct 12053 CAAGACCGTCCGTGGCGCGTGGGCGAACGTCGGTGCGTCTCTCGGCCGCCTCGGGGCCA 12111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189274398400224