Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_023722.1
Length=59231
Score E
Sequences producing significant alignments: (Bits) Value
seq63378 136 1e-27
>seq63378
Length=15302
Score = 136 bits (150), Expect = 1e-27
Identities = 357/539 (66%), Gaps = 8/539 (1%)
Strand=Plus/Plus
Query 21106 AAGGGCCTGGACCGACTGACCGCGATCGACAACGCGAAGGCCAAGCTGTCCGGCCTG--G 21163
|||||| | | |||||| || |||||| ||||||||| |||||| ||||||| |
Sbjct 11577 AAGGGCATCGCCCGACTCCTCGACATCGACGACGCGAAGGGCAAGCTCGCCGGCCTCAAG 11636
Query 21164 GCCACGAGGCGGGCACTGTCCAGCAGATCATGGACAACGCGATGAACTCGGTGAAGGGCA 21223
| ||| | || || || | ||||||||||| ||| || | || || || |
Sbjct 11637 ACGTCGACGAAGG-ACA-TCGCGTCGATCATGGACAGCGCCCTGCAGTCCGTCCGCGGGA 11694
Query 21224 CCGCATACGGTCTCGGCGACGCTGCCTCCGTCGCGGCCGGCGCTGTCGCTGCGGGTATCA 21283
|||| | ||||||||||||||| || ||| || | ||| ||||| || |||||||
Sbjct 11695 CCGCCTTCGGTCTCGGCGACGCAGCTGGCGTTGCATCGAACGCCGTCGCCGCCGGTATCA 11754
Query 21284 AGCCGGGC--GCCGAACTCGAACGGACCCTGAAGGTCATCGGTGACTCCGCGTCGATCGC 21341
|||| ||| | || | |||| | ||| ||| ||| || ||| | || | |||||
Sbjct 11755 AGCCCGGCCAGGCGCTCACGAA--GTACCTCAAGCTCACCGCCGACGCGGCCACCATCGC 11812
Query 21342 GGGTGTCGAACTCGGTGACATGGGCGCGATCTTCAACAAGGTCGCCGCGTCGAACAAGAT 21401
|||||| |||| || |||||| ||||| |||||||| || | |||| |
Sbjct 11813 TGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAAGACGACCACCAGCGGCAAGGT 11872
Query 21402 CCAGGGCGACGTCATCGCCCAGCTCTCCGACGCCGGTATCCCGGTCGTCCAGTTGCTCGG 21461
| | ||| | || ||||||| | ||| || |||||| || |||||| |||
Sbjct 11873 CTACACGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCA 11932
Query 21462 GAAGGAACTGGGCAAGACCTCGGAGGAGGTCCTGGCCCTGGCCTCGGAGGGCAAGATCAA 21521
|||||| ||| || | || || || | | ||| |||| |||||||| || |
Sbjct 11933 GAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGTCGA 11992
Query 21522 CTTCGAGACCTTCCAGAACGCGATGGAGAAGGGCATGGGTGGGGCCGCGCTGAAGGCGGG 21581
|| | ||||||| || | || ||| || ||| || || || || || | ||
Sbjct 11993 CTCGGCCACCTTCCGCAAGGTCATCGAGGAGAACATCGGCGGCGCGGCCCTCGCTTCCGG 12052
Query 21582 CGACACCTTCAAGGGCGCGGTGGACAACGCCGGCGCCGCGCTGGGCCGTCTCGGTGCCA 21640
| | ||| || |||||| || |||| ||| || | || ||||| ||||| ||||
Sbjct 12053 CAAGACCGTCCGTGGCGCGTGGGCGAACGTCGGTGCGTCTCTCGGCCGCCTCGGGGCCA 12111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 189274398400224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |