Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023730.1 Length=42594 Score E Sequences producing significant alignments: (Bits) Value seq45924 80.6 7e-11 >seq45924 Length=9929 Score = 80.6 bits (88), Expect = 7e-11 Identities = 111/152 (73%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 32700 CTGCACGCAGACCGACCCCGAGGTGTTCTATCCCGAGAAAGGCGAATCGGTTGAACC--- 32756 |||| |||||||||||||||||| ||||| |||||||| |||| | | | || Sbjct 5567 CTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCG----GCTCCACCCGCG 5512 Query 32757 -GGCGCGCACCATCTGCGCGCGGTGCGATGTGCGGGCCAAGTGCCTAGAGGTCGCGCTCG 32815 |||| | |||||| | |||||| || ||| | ||||||| ||| ||| |||| Sbjct 5511 AGGCGAAGAAGATCTGCACCTCGTGCGAGGTCCGGTCGCAGTGCCTCGAGTACGCACTCG 5452 Query 32816 CCAACGATGAAGCG-TTCGGCATCTGGGGCGG 32846 ||||| | |||| |||||||||||||| || Sbjct 5451 AGAACGACG-AGCGCTTCGGCATCTGGGGTGG 5421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136076247163008