Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_023732.1 Length=69279 Score E Sequences producing significant alignments: (Bits) Value seq62752 149 3e-31 >seq62752 Length=6345 Score = 149 bits (164), Expect = 3e-31 Identities = 428/650 (66%), Gaps = 15/650 (2%) Strand=Plus/Minus Query 50493 GACCACATTCGCCAGTTGCATCGGCTGGGGTTCCTGCCGCTGCGGTTCTGCGCGGTGCCT 50552 |||||| | ||| |||| || ||||| | ||||||||| | || ||||| |||| Sbjct 2866 GACCACGTCCGCGCCCTGCACCGCCTGGGCTACCTGCCGCTCGAGATCCGCGCGCTGCCC 2807 Query 50553 GAGGGGACGCTAGTGCCTATCGGGGTGCCGTCGTTCACGGTGGAGAACACGCATGAGTCG 50612 ||||| || || | || ||||| || | | | ||||| |||||||| || | Sbjct 2806 GAGGGCACCCTCGCTCCGATCGGCGTCGCCACCCTGACGGTCGAGAACACCGTCGACGAG 2747 Query 50613 TTCTACTGGCTAACCAACTACATCGAGACCGGCCTGAGCGCCGGGGTGTGGCAGGCCAGC 50672 |||| |||||| | |||||||||||||||| ||| || | | ||||| || Sbjct 2746 TTCTTCTGGCTGCCGAACTACATCGAGACCGCACTGTCTGCGTCGATCTGGCACCCCTCG 2687 Query 50673 ACGAGCGCGACCATCGCTAAGCACTATCGGCGGGTGCTTGAGGCCGCGGCCTTGCGGACC 50732 ||| ||| || | || | || || | | |||| | |||| || ||| Sbjct 2686 ACGGTCGCCACGAAGGCGCTCGAGTACCGCGACCTCATGGAGGACTGGGCCGCCCGCACC 2627 Query 50733 GGTGCGGACCTGGCGGGCGTCGACTG-GCAGTGCCATGACTTCTCTTACCG-GGGCATGT 50790 ||||| || | ||| || |||||| || | ||| |||||||| | ||| ||||| || Sbjct 2626 GGTGCAGATCCCGCGAGCATCGACTTCGCCGC-CCACGACTTCTCGTTCCGCGGGCA-GT 2569 Query 50791 CCTCGCAT-GAGAGCGCGGCGGCGTCGGGCGCGGCGCACCTGCTGAGCTTCACCGGTACG 50849 | |||| ||| || |||||| || || | |||||||| ||| ||| || Sbjct 2568 CGA-GCATCGAGTCGGCCGCGGCGGGCGGTGCCGGACACCTGCTCTCGTTCCTCGGCACC 2510 Query 50850 GACTCGCTGGTGTCGCTGGATTGGATCGACCGTTACTACGGCGGCGATTACG------TG 50903 |||||| || || || || | |||||||| |||||| |||||| ||| || Sbjct 2509 GACTCGATGCCCTCCCTCGACTTCATCGACCGCTACTACCCCGGCGACAACGGCTGGGTG 2450 Query 50904 GCGGGTTCTGTTCCGGCTACCGAGCACTCGGTGATGTGTACCGGCATTGAGACGGTCGGG 50963 |||| || || || ||||||||| || ||||| | || | | | ||| Sbjct 2449 GCGGCGAGCGTCCCCGCGACCGAGCACAGCGTCATGTGCGTCCGCGGCG---CCGACGGC 2393 Query 50964 GAGCTTGAGACGTTTAGGCGGCTGCTGGACCTGTACCCGTCCGGCATCGTTAGCGTCGTT 51023 ||||| ||||| || || | | || ||| |||||||| | |||||||| | || Sbjct 2392 GAGCTGGAGACCTTCGCGCAGATCCTCGACGTGTACCCGACGGGCATCGTCTCGGCGGTG 2333 Query 51024 AGCGACACGTTCGACCTGTGGAAGGTGCTAACCACGTACCTGCCGACGCTGTATAAGCAG 51083 |||||| |||||||||| ||||| || ||| | || ||| ||| | | | Sbjct 2332 AGCGACGGCTTCGACCTGTTCAAGGTCCTCACCGAGACGCTCCCGCAGCTCAAGGACCGC 2273 Query 51084 ATCGTGGGCCGGGACGGCAAGCTGGTCATTCGGCCTGACTCCGGCGATCC 51133 ||| | ||| ||||||||||| ||||| || || ||||| ||||| || Sbjct 2272 ATCACCGCCCGCGACGGCAAGCTCGTCATCCGTCCGGACTCGGGCGACCC 2223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 221396084280960