Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_024135.1 Length=42392 Score E Sequences producing significant alignments: (Bits) Value seq45924 105 2e-18 >seq45924 Length=9929 Score = 105 bits (116), Expect = 2e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 31506 CTGTGCCCGCAAACGGATCCCGACGTGTTCTTCCCCGAAAAGGGCGGCAGCACCAAAGAA 31565 || ||| |||| || || ||||| | |||||||||||| ||||||||| |||| || Sbjct 5569 CTCTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCGGCTCCACCCGCGAG 5510 Query 31566 GCGAAAGCGATCTGTGGGCTGTGCGATGTCCGCAACGAATGCCTGGAGTACGCGTTGGCG 31625 ||||| |||||| |||||| ||||| | ||||| |||||||| | | | Sbjct 5509 GCGAAGAAGATCTGCACCTCGTGCGAGGTCCGGTCGCAGTGCCTCGAGTACGCACTCGAG 5450 Query 31626 CACGACGAACGATTCGGCATCTGGGGCGGCTTATCCGAGCGTGACCGGCGC 31676 ||||||| || |||||||||||||| || | |||||||| || || ||| Sbjct 5449 AACGACGAGCGCTTCGGCATCTGGGGTGGGCTGTCCGAGCGCGAGCGCCGC 5399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135430335847872