Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq6171 84.2 5e-11 >seq6171 Length=36435 Score = 84.2 bits (92), Expect = 5e-11 Identities = 149/213 (70%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 131796 TTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTA 131855 || ||||||| || ||||||| || ||||| |||| ||||| || |||| Sbjct 4755 TTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGATC---GATGGTTCCG--AAACTTTCGC 4809 Query 131856 CAAGA-CTTG-TAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGC 131913 || |||| | |||||||||||||||||||| || ||||| || |||||| | Sbjct 4810 GGAGCGCTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTC 4869 Query 131914 TATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCAT 131973 || |||||| | || || || || || ||||||||| | | || || ||| | || || Sbjct 4870 GATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAAT 4929 Query 131974 CTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || ||||| |||| ||||| ||| ||||| Sbjct 4930 TTCAAGAGACGAAGGTTTGCACTGTGATTTTGC 4962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185844722733104