Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq6171 84.2 5e-11
>seq6171
Length=36435
Score = 84.2 bits (92), Expect = 5e-11
Identities = 149/213 (70%), Gaps = 7/213 (3%)
Strand=Plus/Plus
Query 131796 TTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTA 131855
|| ||||||| || ||||||| || ||||| |||| ||||| || ||||
Sbjct 4755 TTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGATC---GATGGTTCCG--AAACTTTCGC 4809
Query 131856 CAAGA-CTTG-TAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGC 131913
|| |||| | |||||||||||||||||||| || ||||| || |||||| |
Sbjct 4810 GGAGCGCTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTC 4869
Query 131914 TATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCAT 131973
|| |||||| | || || || || || ||||||||| | | || || ||| | || ||
Sbjct 4870 GATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAAT 4929
Query 131974 CTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| ||||| |||| ||||| ||| |||||
Sbjct 4930 TTCAAGAGACGAAGGTTTGCACTGTGATTTTGC 4962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1185844722733104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |