Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq63531 109 5e-19 >seq63531 Length=42858 Score = 109 bits (120), Expect = 5e-19 Identities = 190/271 (70%), Gaps = 9/271 (3%) Strand=Plus/Minus Query 142549 TCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCT 142608 || || || | ||||||| | ||||||||| || || || ||| ||||| || | Sbjct 32119 TCCCGCCGGCTCATCGTCTCGGCGTGGAACGTCGCCGAGGTGCCCGAGATGGCGCTGGCC 32060 Query 142609 CCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTGTCATGCCAGC 142666 ||||| ||| | | ||||| ||||||||| || || | |||| | || ||||||| Sbjct 32059 CCGTGCCACGCGTTCTTCCAGTTCCACGTCAAC--GACGGCAAGC---TCTCGTGCCAGC 32005 Query 142667 TGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGC 142726 |||| ||||| || ||| ||||||||| || ||||||||||| || |||||||||| Sbjct 32004 TGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATCGCCTCGTACGCGC 31945 Query 142727 TTCTCACACAGCTCATTGC-TCGCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACC 142785 | || || || | || || ||| | ||| || || |||| |||||||| ||| Sbjct 31944 TGCTGACCCACATGATCGCGGCGC-AGACCGGGCTCGAGGTCGGCGACTTCGTGTGGACC 31886 Query 142786 TTCGGCAATTCGCACATCTACGATACACACG 142816 ||| | | ||| ||||||| | |||| Sbjct 31885 GGTGGCGACTGCCACGTCTACGACAACCACG 31855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500100902736640