Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_025429.1
Length=156446
Score E
Sequences producing significant alignments: (Bits) Value
seq63531 109 5e-19
>seq63531
Length=42858
Score = 109 bits (120), Expect = 5e-19
Identities = 190/271 (70%), Gaps = 9/271 (3%)
Strand=Plus/Minus
Query 142549 TCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCT 142608
|| || || | ||||||| | ||||||||| || || || ||| ||||| || |
Sbjct 32119 TCCCGCCGGCTCATCGTCTCGGCGTGGAACGTCGCCGAGGTGCCCGAGATGGCGCTGGCC 32060
Query 142609 CCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTGTCATGCCAGC 142666
||||| ||| | | ||||| ||||||||| || || | |||| | || |||||||
Sbjct 32059 CCGTGCCACGCGTTCTTCCAGTTCCACGTCAAC--GACGGCAAGC---TCTCGTGCCAGC 32005
Query 142667 TGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGC 142726
|||| ||||| || ||| ||||||||| || ||||||||||| || ||||||||||
Sbjct 32004 TGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATCGCCTCGTACGCGC 31945
Query 142727 TTCTCACACAGCTCATTGC-TCGCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACC 142785
| || || || | || || ||| | ||| || || |||| |||||||| |||
Sbjct 31944 TGCTGACCCACATGATCGCGGCGC-AGACCGGGCTCGAGGTCGGCGACTTCGTGTGGACC 31886
Query 142786 TTCGGCAATTCGCACATCTACGATACACACG 142816
||| | | ||| ||||||| | ||||
Sbjct 31885 GGTGGCGACTGCCACGTCTACGACAACCACG 31855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500100902736640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |