Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq4583 592 5e-165 seq63621 526 6e-145 seq43996 439 7e-119 seq59810 168 2e-37 seq1272 168 2e-37 seq2280 154 4e-33 seq17562 147 6e-31 seq1857 123 7e-24 seq34978 113 1e-20 seq10757 91.5 4e-14 seq24279 84.2 7e-12 >seq4583 Length=37858 Score = 592 bits (656), Expect = 5e-165 Identities = 727/983 (74%), Gaps = 10/983 (1%) Strand=Plus/Minus Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 36905 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 36846 Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628 || | || ||| | || | |||| || ||||||| |||||||| ||||| |||| Sbjct 36845 CCC-TACCTTATTGACGGCAACTTCTGTATTTGTTATTGCCTTCATTGCTGCTCCTCCAG 36787 Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688 | ||||||||||| || || ||||| || || || || ||||| | ||||||||| | Sbjct 36786 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGAAAACAACATTA 36727 Query 19689 TATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 19746 | | || ||| | |||| | | ||| || || || |||| || |||||||| || Sbjct 36726 TTTTCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTACATTTTTACCCAATCTG 36669 Query 19747 GGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 19806 |||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 36668 GGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCT 36609 Query 19807 CCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACT 19866 |||||| | ||||| | | ||||||||| || |||||||| ||||||| || || Sbjct 36608 ACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCT 36549 Query 19867 AGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGT 19926 || ||| | ||||||||| |||||| || || ||||| |||||||| || | || || Sbjct 36548 GGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGT 36489 Query 19927 CTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985 ||||| | ||||||| ||||||| || || || || |||| ||||||| | || |||| Sbjct 36488 -TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCT 36430 Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045 | ||||| ||||| | |||| | |||||||| || || || ||||| || |||||||| | Sbjct 36429 CTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 36370 Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105 | |||||| | || || ||||| |||||||| || || ||||||||||| ||||| |||| Sbjct 36369 TTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 36310 Query 20106 CGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGT 20164 | |||| || | || | ||| | | || || || ||| | ||| | || | ||| Sbjct 36309 C-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 36251 Query 20165 TACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGA 20224 |||| || || ||||| ||||| || ||||| |||||||||||||||||||| ||||| Sbjct 36250 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 36191 Query 20225 CGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCT 20284 || |||||||||||||| ||| ||||||||| ||||| ||||||||||| | ||| Sbjct 36190 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCT 36131 Query 20285 GCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAAT 20344 || ||||| || ||||| || ||||| | || || || | || ||||| || || Sbjct 36130 GCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAAC 36071 Query 20345 CTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACT 20404 || || |||||||| || ||||| || | | |||| | |||||||| ||| | ||| Sbjct 36070 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACT 36011 Query 20405 TGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCT 20464 |||||||| || |||| |||||||| || || | || || ||||||||||| |||||| Sbjct 36010 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 35951 Query 20465 CATAACTTCCCACTTGACCTTGC 20487 ||||||||||| || ||||| || Sbjct 35950 CATAACTTCCCTCTAGACCTAGC 35928 >seq63621 Length=23796 Score = 526 bits (582), Expect = 6e-145 Identities = 614/822 (75%), Gaps = 8/822 (1%) Strand=Plus/Minus Query 19670 CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGAC 19727 ||||| ||||||||||| || || || ||| | |||| | | ||| || || || Sbjct 20774 CTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTT 20717 Query 19728 TACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGAC 19787 |||| || |||||||| |||||||| || ||||||||||| | |||||||| || | Sbjct 20716 TACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTC 20657 Query 19788 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGT 19847 | | |||| | || | |||||| | ||||| | | ||||||||| || |||| Sbjct 20656 CTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGT 20597 Query 19848 GGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGG 19907 |||| ||||||| || || || ||| | ||||||||| |||||| || || ||||| | Sbjct 20596 GGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 20537 Query 19908 TTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGAT 19966 ||||||| || | || || ||||| | ||||||| ||||||| || || || || ||| Sbjct 20536 TTGCAGCTGCTACCGCAGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGAT 20478 Query 19967 GCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACAT 20026 | ||||||| | || ||||| ||||| ||||| | |||| | |||||||| || || || Sbjct 20477 GGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCAC 20418 Query 20027 AACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTA 20086 ||||| || |||||||| || |||||| | || || ||||| |||||||| || || ||| Sbjct 20417 AACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTA 20358 Query 20087 TTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACA 20145 |||||||| ||||| ||||| |||| || | || | ||| | | || || || ||| | Sbjct 20357 TTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 20299 Query 20146 GGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGC 20205 ||| | || | ||||||| || || ||||| ||||| || ||||| |||||||| Sbjct 20298 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 20239 Query 20206 CGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTC 20265 |||||||||||| ||||| || |||||||||||||| ||| ||||||||| ||||| Sbjct 20238 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 20179 Query 20266 TCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGT 20325 ||||||||||| | ||||| ||||| || ||||| || ||||| | || || || | Sbjct 20178 GTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTAT 20119 Query 20326 TTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAA 20385 || ||||| || || || || |||||||| || ||||| || | | |||| | Sbjct 20118 CAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCA 20059 Query 20386 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGT 20445 |||||||| ||| | ||||||||||| || |||| |||||||| || || | || || Sbjct 20058 GGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGT 19999 Query 20446 GATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 ||||||||||| ||||||||||||||||| || ||||| || Sbjct 19998 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 19957 Score = 343 bits (380), Expect = 4e-90 Identities = 405/545 (74%), Gaps = 6/545 (1%) Strand=Plus/Minus Query 19944 TTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACA 20003 ||||||| || || || || |||| ||||||| | | ||||| ||||| ||||| | || Sbjct 21467 TTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTCAATTTCA 21408 Query 20004 TGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGG 20063 || | |||||||| || || || ||||| || |||||||| || |||||| | || || | Sbjct 21407 TGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 21348 Query 20064 CTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 20123 || | |||||||| || || ||||||||||| ||||| ||||| |||| || | || | Sbjct 21347 CTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGT 21289 Query 20124 TTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAA 20182 ||| | | || || || ||| | ||| | || | ||||||| ||||| ||||| Sbjct 21288 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGGTCAAGAG 21229 Query 20183 GAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATAC 20242 ||||| || ||||| | |||||||||||||||||| ||||| || |||||||||||||| Sbjct 21228 GAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 21169 Query 20243 GCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGG 20302 ||| ||||||||| |||| ||||||||||| | ||||| ||||| || ||||| Sbjct 21168 GCTAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGT 21109 Query 20303 ATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTT 20362 || ||||| | || || || | || |||| || || || || ||||| || Sbjct 21108 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT----TTC 21053 Query 20363 AACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAAT 20422 ||||| || | | |||| | |||||||| ||| | | ||||||||| || |||| Sbjct 21052 AACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATATCATCAAC 20993 Query 20423 CGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGAC 20482 |||||||| || || | || || ||||||||||| |||||| |||||||||| || ||| Sbjct 20992 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCCTCTAGAC 20933 Query 20483 CTTGC 20487 || || Sbjct 20932 CTAGC 20928 >seq43996 Length=12529 Score = 439 bits (486), Expect = 7e-119 Identities = 597/825 (72%), Gaps = 12/825 (1%) Strand=Plus/Minus Query 19667 CTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCG 19724 || ||||| ||||||||||| || || || ||| | |||| | | ||| || || | Sbjct 1624 CTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAG 1567 Query 19725 GACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGG 19784 | |||| || |||||||| |||||||| || ||||||||||| | |||||||| | Sbjct 1566 GTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTG 1507 Query 19785 GACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAG 19844 | || | |||| | || | |||||| | ||||| | | ||||||||| || | Sbjct 1506 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTG 1447 Query 19845 AGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTC 19904 ||||||| ||||||| || || || ||| | ||||||||| |||||| || || |||| Sbjct 1446 AGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCATATTCAGCTC 1387 Query 19905 CGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCC 19963 | |||||| | || || || ||||| | ||||||| | | ||| | || || || Sbjct 1386 CAGTTGCAACTGCTATCGCAGT-TTTCTTGATCTACCCAATCGATCAATGAAGTTTTTCT 1328 Query 19964 GATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAA 20023 || ||| | ||| || ||||| ||||| ||||| | |||| | ||||||| || Sbjct 1327 AATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCCA----GAG 1272 Query 20024 CATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCA 20083 || ||||| || |||||||| || |||||| | || || ||||| ||||| | || || Sbjct 1271 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTAGCGGCTCC 1212 Query 20084 CTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTG-AGACTACTGA 20142 ||||| |||| ||||| ||||| |||| || || || | ||| | || | || || | Sbjct 1211 CTATTAAGTGTTATGCATGGTTC-CTTGGTAAGTTCTAGTTTGATCATGGAAACCACAAA 1153 Query 20143 ACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGT 20202 | | ||| | || | |||||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1152 AAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATCGT 1093 Query 20203 AGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCG 20262 ||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| || Sbjct 1092 AGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTTTCG 1033 Query 20263 TTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 20322 ||| ||||||||||||| ||| ||||| || ||||| || | ||| | || || || Sbjct 1032 TTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTACCGCTTTAGG 973 Query 20323 CGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAA 20382 | || ||||| | || || || |||||||| || |||||||| | | || | Sbjct 972 TATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAG 913 Query 20383 CAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGA 20442 | | |||||| ||| | |||| |||||| || ||||||||||||| | || | || Sbjct 912 TCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACATTGGTATGGA 853 Query 20443 GGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 || ||||||||||| |||||||||| |||||| || ||||| || Sbjct 852 AGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGC 808 Score = 96.9 bits (106), Expect = 1e-15 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || |||||||| ||||||| ||||| | ||| ||||||||||| || | |||| | Sbjct 1818 TTTATTATTGCCTTCATTGTTGCTCCTCTAGTAGACATTGATGGTATTCATTAACCTATT 1759 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA--GCAGCA 19715 | || || ||||||||||||||||| || || || ||| | |||| | | ||| Sbjct 1758 TTAGGGTCTCTACTTTATGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1699 Query 19716 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCT 19775 || || || || | || || |||||||||||||| ||| ||||||||||| | | Sbjct 1698 --GCTATAGGTTTATATTTTTATCCAATTTGGGAAGCGGCTTCTGTTGATGAATGGTTAT 1641 Query 19776 ACAA 19779 |||| Sbjct 1640 ACAA 1637 >seq59810 Length=2273 Score = 168 bits (186), Expect = 2e-37 Identities = 215/292 (74%), Gaps = 3/292 (1%) Strand=Plus/Minus Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047 ||||| ||||| | ||| | |||||||| || || || ||||| || |||||||| || Sbjct 514 GGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 455 Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107 ||||| | || | ||||||||| || || || ||||||||||| ||||| | ||| Sbjct 454 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC- 396 Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTA 20166 |||| || | || | ||| | | || | || ||| | ||| | || | ||||| Sbjct 395 CTTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336 Query 20167 CAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACG 20226 || || || ||||| ||||| || || || |||||||||||||||| ||| ||||| || Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276 Query 20227 TTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278 |||||||||||||| ||| ||||||||| ||||| ||||| ||||| Sbjct 275 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC-GTACACATCTTC 225 >seq1272 Length=458668 Score = 168 bits (186), Expect = 2e-37 Identities = 218/295 (74%), Gaps = 6/295 (2%) Strand=Plus/Minus Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047 ||||| ||||| | |||| | |||||||| || || || ||||| || |||||||| || Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353 Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107 ||||| | || | ||| ||||| || || || ||||||||||| ||||| | ||| Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTC- 207294 Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGT-CAG--AACTATGG 20163 |||| || | || | ||| | | || | ||| ||| | ||| | | | || | || Sbjct 207293 CTTGGTAACTTCTAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGG 207234 Query 20164 TTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGG 20223 ||| | ||||| ||||| ||||| || | || |||||||||||||||| ||| ||||| Sbjct 207233 TTAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGG 207174 Query 20224 ACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278 || |||||||||||||| ||| ||||||||| |||||| ||||| ||||| Sbjct 207173 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT-TACACATCTTC 207120 >seq2280 Length=1098 Score = 154 bits (170), Expect = 4e-33 Identities = 176/234 (75%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 20078 GGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAGAC 20136 || || ||||||||||| ||||| ||||| |||| || | || | ||| | | || || Sbjct 1097 GGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAAC 1039 Query 20137 TACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAA 20196 || ||| | ||| | || | ||||||| || | ||||| ||||| || ||||| Sbjct 1038 CACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAA 979 Query 20197 CATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAA 20256 |||||||||||||||||||| ||||| | |||||||||||||| ||| ||||||||| Sbjct 978 TATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAACAA 919 Query 20257 TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310 ||||| ||||||||||| | | ||| ||||| || ||||| || ||||| Sbjct 918 CTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 865 Score = 114 bits (126), Expect = 4e-21 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 20193 ATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCA 20252 |||| |||||||||||||||||||| ||||| | |||||||||||||| ||| ||||| Sbjct 830 ATAATATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCA 771 Query 20253 ACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310 |||| ||||| ||||||||||| | | ||| ||||| || ||||| || ||||| Sbjct 770 ACAACTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 713 >seq17562 Length=33771 Score = 147 bits (162), Expect = 6e-31 Identities = 187/255 (73%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 20003 ATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTG 20062 ||| | |||||||| || || || ||||| || |||||||| || ||||| | || | Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256 Query 20063 GCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 20122 ||||||||| || || || ||||||||||| ||||| | ||| |||| || | || | Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC-CTTGGTAACTTCTAG 25197 Query 20123 CTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGA 20181 ||| | | || | || ||| | ||| | || | ||||||| || | ||||| Sbjct 25196 TTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGA 25137 Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241 ||||| || || || |||||||||| ||||| ||| ||||| || |||||||||||||| Sbjct 25136 GGAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATA 25077 Query 20242 CGCTTCTTTCAACAA 20256 ||| ||||||||| Sbjct 25076 TGCTAGTTTCAACAA 25062 Score = 84.2 bits (92), Expect = 7e-12 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 19982 ATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCAC 20041 ||||||| ||| ||||| | |||| | |||||||| || || || ||||| || |||||| Sbjct 25510 ATCTCGG-TACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 25452 Query 20042 CCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCAC 20101 | || ||||| | || | || ||||| ||||| || ||||||||||| ||||| Sbjct 25451 CTATTTCACATCTTAGGCCTAGCCTGTGTAAAAGGTGGCTCCCTATTCAGTGCTATGCAT 25392 Query 20102 GGTTCGCTTGTTA 20114 | ||| |||| || Sbjct 25391 GCTTC-CTTGGTA 25380 >seq1857 Length=125658 Score = 123 bits (136), Expect = 7e-24 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 20287 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 20346 |||||| || ||||| || ||||| | || || || | || ||||| || || || Sbjct 75468 CTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCT 75527 Query 20347 GAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTG 20406 || |||||||| || ||||| || | | |||| | |||||||| ||| | ||||| Sbjct 75528 AAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTG 75587 Query 20407 GGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCA 20466 |||||| || ||||| |||||| || || | || || |||||| |||| |||||||| Sbjct 75588 GGCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCA 75647 Query 20467 TAACTTCCCACTTGACCTTGC 20487 ||||||||| || ||||| || Sbjct 75648 TAACTTCCCTCTAGACCTAGC 75668 >seq34978 Length=12172 Score = 113 bits (124), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 5450 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 5391 Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628 || | || ||| | || | |||| || |||||||| |||||||| ||||| |||| Sbjct 5390 CCC-TACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAG 5332 Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688 | ||||||||||| || || ||||| || || || || ||||| ||||||||||| | Sbjct 5331 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTA 5272 Query 19689 TATCGGGAGCCGTCGTTCC 19707 | || || ||| | |||| Sbjct 5271 TTTCCGGTGCCATTATTCC 5253 >seq10757 Length=79858 Score = 91.5 bits (100), Expect = 4e-14 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221 ||||| | ||||| ||||| ||||| || || || ||| |||||||||||| ||| ||| Sbjct 73463 GGTTATAGATTTGGTCAAGAGGAAGAAACTTAGAATATCATAGCCGCTCATGCTTATTTT 73404 Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAA 20256 || | |||||||||||||| ||| ||||||||| Sbjct 73403 GGCTGATTGATCTTCCAATAGTCTTGTTTCAACAA 73369 >seq24279 Length=4008 Score = 84.2 bits (92), Expect = 7e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 20178 AAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCC 20237 |||| ||||| || || || |||||||||||||||| ||| ||||| || |||||||||| Sbjct 1909 AAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCGATTGATCTTCC 1850 Query 20238 AATACGCTTCTTTCAACAA 20256 |||| | | ||||||||| Sbjct 1849 AATATGTTAGTTTCAACAA 1831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148716283938912