Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 592 5e-165
seq63621 526 6e-145
seq43996 439 7e-119
seq59810 168 2e-37
seq1272 168 2e-37
seq2280 154 4e-33
seq17562 147 6e-31
seq1857 123 7e-24
seq34978 113 1e-20
seq10757 91.5 4e-14
seq24279 84.2 7e-12
>seq4583
Length=37858
Score = 592 bits (656), Expect = 5e-165
Identities = 727/983 (74%), Gaps = 10/983 (1%)
Strand=Plus/Minus
Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569
||||||| | ||| || | ||||||||||| |||| |||||||| |||||||
Sbjct 36905 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 36846
Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628
|| | || ||| | || | |||| || ||||||| |||||||| ||||| ||||
Sbjct 36845 CCC-TACCTTATTGACGGCAACTTCTGTATTTGTTATTGCCTTCATTGCTGCTCCTCCAG 36787
Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688
| ||||||||||| || || ||||| || || || || ||||| | ||||||||| |
Sbjct 36786 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGAAAACAACATTA 36727
Query 19689 TATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 19746
| | || ||| | |||| | | ||| || || || |||| || |||||||| ||
Sbjct 36726 TTTTCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTACATTTTTACCCAATCTG 36669
Query 19747 GGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 19806
|||||| || ||||||||||| | |||||||| || || | |||| | || |
Sbjct 36668 GGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCT 36609
Query 19807 CCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACT 19866
|||||| | ||||| | | ||||||||| || |||||||| ||||||| || ||
Sbjct 36608 ACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCT 36549
Query 19867 AGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGT 19926
|| ||| | ||||||||| |||||| || || ||||| |||||||| || | || ||
Sbjct 36548 GGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGT 36489
Query 19927 CTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCT 19985
||||| | ||||||| ||||||| || || || || |||| ||||||| | || ||||
Sbjct 36488 -TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCT 36430
Query 19986 CGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGT 20045
| ||||| ||||| | |||| | |||||||| || || || ||||| || |||||||| |
Sbjct 36429 CTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 36370
Query 20046 TCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTT 20105
| |||||| | || || ||||| |||||||| || || ||||||||||| ||||| ||||
Sbjct 36369 TTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 36310
Query 20106 CGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAGTCAGAACTATGGT 20164
| |||| || | || | ||| | | || || || ||| | ||| | || | |||
Sbjct 36309 C-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 36251
Query 20165 TACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGA 20224
|||| || || ||||| ||||| || ||||| |||||||||||||||||||| |||||
Sbjct 36250 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGC 36191
Query 20225 CGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCT 20284
|| |||||||||||||| ||| ||||||||| ||||| ||||||||||| | |||
Sbjct 36190 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCT 36131
Query 20285 GCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAAT 20344
|| ||||| || ||||| || ||||| | || || || | || ||||| || ||
Sbjct 36130 GCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAAC 36071
Query 20345 CTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACT 20404
|| || |||||||| || ||||| || | | |||| | |||||||| ||| | |||
Sbjct 36070 CTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACT 36011
Query 20405 TGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCT 20464
|||||||| || |||| |||||||| || || | || || ||||||||||| ||||||
Sbjct 36010 TGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 35951
Query 20465 CATAACTTCCCACTTGACCTTGC 20487
||||||||||| || ||||| ||
Sbjct 35950 CATAACTTCCCTCTAGACCTAGC 35928
>seq63621
Length=23796
Score = 526 bits (582), Expect = 6e-145
Identities = 614/822 (75%), Gaps = 8/822 (1%)
Strand=Plus/Minus
Query 19670 CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGAC 19727
||||| ||||||||||| || || || ||| | |||| | | ||| || || ||
Sbjct 20774 CTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTT 20717
Query 19728 TACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGAC 19787
|||| || |||||||| |||||||| || ||||||||||| | |||||||| || |
Sbjct 20716 TACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTC 20657
Query 19788 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGT 19847
| | |||| | || | |||||| | ||||| | | ||||||||| || ||||
Sbjct 20656 CTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGT 20597
Query 19848 GGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGG 19907
|||| ||||||| || || || ||| | ||||||||| |||||| || || ||||| |
Sbjct 20596 GGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 20537
Query 19908 TTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGAT 19966
||||||| || | || || ||||| | ||||||| ||||||| || || || || |||
Sbjct 20536 TTGCAGCTGCTACCGCAGT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGAT 20478
Query 19967 GCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACAT 20026
| ||||||| | || ||||| ||||| ||||| | |||| | |||||||| || || ||
Sbjct 20477 GGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCAC 20418
Query 20027 AACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTA 20086
||||| || |||||||| || |||||| | || || ||||| |||||||| || || |||
Sbjct 20417 AACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTA 20358
Query 20087 TTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACA 20145
|||||||| ||||| ||||| |||| || | || | ||| | | || || || ||| |
Sbjct 20357 TTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 20299
Query 20146 GGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGC 20205
||| | || | ||||||| || || ||||| ||||| || ||||| ||||||||
Sbjct 20298 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 20239
Query 20206 CGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTC 20265
|||||||||||| ||||| || |||||||||||||| ||| ||||||||| |||||
Sbjct 20238 CGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 20179
Query 20266 TCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGT 20325
||||||||||| | ||||| ||||| || ||||| || ||||| | || || || |
Sbjct 20178 GTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTAT 20119
Query 20326 TTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAA 20385
|| ||||| || || || || |||||||| || ||||| || | | |||| |
Sbjct 20118 CAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCA 20059
Query 20386 TGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGT 20445
|||||||| ||| | ||||||||||| || |||| |||||||| || || | || ||
Sbjct 20058 GGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGT 19999
Query 20446 GATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
||||||||||| ||||||||||||||||| || ||||| ||
Sbjct 19998 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 19957
Score = 343 bits (380), Expect = 4e-90
Identities = 405/545 (74%), Gaps = 6/545 (1%)
Strand=Plus/Minus
Query 19944 TTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACA 20003
||||||| || || || || |||| ||||||| | | ||||| ||||| ||||| | ||
Sbjct 21467 TTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTCAATTTCA 21408
Query 20004 TGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGG 20063
|| | |||||||| || || || ||||| || |||||||| || |||||| | || || |
Sbjct 21407 TGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 21348
Query 20064 CTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 20123
|| | |||||||| || || ||||||||||| ||||| ||||| |||| || | || |
Sbjct 21347 CTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGT 21289
Query 20124 TTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAA 20182
||| | | || || || ||| | ||| | || | ||||||| ||||| |||||
Sbjct 21288 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGGTCAAGAG 21229
Query 20183 GAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATAC 20242
||||| || ||||| | |||||||||||||||||| ||||| || ||||||||||||||
Sbjct 21228 GAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 21169
Query 20243 GCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGG 20302
||| ||||||||| |||| ||||||||||| | ||||| ||||| || |||||
Sbjct 21168 GCTAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGT 21109
Query 20303 ATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTT 20362
|| ||||| | || || || | || |||| || || || || ||||| ||
Sbjct 21108 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT----TTC 21053
Query 20363 AACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAAT 20422
||||| || | | |||| | |||||||| ||| | | ||||||||| || ||||
Sbjct 21052 AACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATATCATCAAC 20993
Query 20423 CGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGAC 20482
|||||||| || || | || || ||||||||||| |||||| |||||||||| || |||
Sbjct 20992 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCCTCTAGAC 20933
Query 20483 CTTGC 20487
|| ||
Sbjct 20932 CTAGC 20928
>seq43996
Length=12529
Score = 439 bits (486), Expect = 7e-119
Identities = 597/825 (72%), Gaps = 12/825 (1%)
Strand=Plus/Minus
Query 19667 CTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCG 19724
|| ||||| ||||||||||| || || || ||| | |||| | | ||| || || |
Sbjct 1624 CTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAG 1567
Query 19725 GACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGG 19784
| |||| || |||||||| |||||||| || ||||||||||| | |||||||| |
Sbjct 1566 GTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTG 1507
Query 19785 GACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAG 19844
| || | |||| | || | |||||| | ||||| | | ||||||||| || |
Sbjct 1506 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTG 1447
Query 19845 AGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTC 19904
||||||| ||||||| || || || ||| | ||||||||| |||||| || || ||||
Sbjct 1446 AGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCATATTCAGCTC 1387
Query 19905 CGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGGTCAGGGTAGCTTCTCC 19963
| |||||| | || || || ||||| | ||||||| | | ||| | || || ||
Sbjct 1386 CAGTTGCAACTGCTATCGCAGT-TTTCTTGATCTACCCAATCGATCAATGAAGTTTTTCT 1328
Query 19964 GATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAA 20023
|| ||| | ||| || ||||| ||||| ||||| | |||| | ||||||| ||
Sbjct 1327 AATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCCA----GAG 1272
Query 20024 CATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCA 20083
|| ||||| || |||||||| || |||||| | || || ||||| ||||| | || ||
Sbjct 1271 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTAGCGGCTCC 1212
Query 20084 CTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTG-AGACTACTGA 20142
||||| |||| ||||| ||||| |||| || || || | ||| | || | || || |
Sbjct 1211 CTATTAAGTGTTATGCATGGTTC-CTTGGTAAGTTCTAGTTTGATCATGGAAACCACAAA 1153
Query 20143 ACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGT 20202
| | ||| | || | |||||||| ||||| ||||| ||||| || ||||| |||||
Sbjct 1152 AAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATCGT 1093
Query 20203 AGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCG 20262
||||||||||||||| ||||| || |||||||||||||| ||| ||||||||| ||
Sbjct 1092 AGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTTTCG 1033
Query 20263 TTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 20322
||| ||||||||||||| ||| ||||| || ||||| || | ||| | || || ||
Sbjct 1032 TTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTACCGCTTTAGG 973
Query 20323 CGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAA 20382
| || ||||| | || || || |||||||| || |||||||| | | || |
Sbjct 972 TATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAG 913
Query 20383 CAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGA 20442
| | |||||| ||| | |||| |||||| || ||||||||||||| | || | ||
Sbjct 912 TCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACATTGGTATGGA 853
Query 20443 GGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487
|| ||||||||||| |||||||||| |||||| || ||||| ||
Sbjct 852 AGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGC 808
Score = 96.9 bits (106), Expect = 1e-15
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657
|| |||||||| ||||||| ||||| | ||| ||||||||||| || | |||| |
Sbjct 1818 TTTATTATTGCCTTCATTGTTGCTCCTCTAGTAGACATTGATGGTATTCATTAACCTATT 1759
Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA--GCAGCA 19715
| || || ||||||||||||||||| || || || ||| | |||| | | |||
Sbjct 1758 TTAGGGTCTCTACTTTATGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1699
Query 19716 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCT 19775
|| || || || | || || |||||||||||||| ||| ||||||||||| | |
Sbjct 1698 --GCTATAGGTTTATATTTTTATCCAATTTGGGAAGCGGCTTCTGTTGATGAATGGTTAT 1641
Query 19776 ACAA 19779
||||
Sbjct 1640 ACAA 1637
>seq59810
Length=2273
Score = 168 bits (186), Expect = 2e-37
Identities = 215/292 (74%), Gaps = 3/292 (1%)
Strand=Plus/Minus
Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047
||||| ||||| | ||| | |||||||| || || || ||||| || |||||||| ||
Sbjct 514 GGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 455
Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107
||||| | || | ||||||||| || || || ||||||||||| ||||| | |||
Sbjct 454 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC- 396
Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTA 20166
|||| || | || | ||| | | || | || ||| | ||| | || | |||||
Sbjct 395 CTTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336
Query 20167 CAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACG 20226
|| || || ||||| ||||| || || || |||||||||||||||| ||| ||||| ||
Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276
Query 20227 TTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278
|||||||||||||| ||| ||||||||| ||||| ||||| |||||
Sbjct 275 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC-GTACACATCTTC 225
>seq1272
Length=458668
Score = 168 bits (186), Expect = 2e-37
Identities = 218/295 (74%), Gaps = 6/295 (2%)
Strand=Plus/Minus
Query 19988 GGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 20047
||||| ||||| | |||| | |||||||| || || || ||||| || |||||||| ||
Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353
Query 20048 CACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCG 20107
||||| | || | ||| ||||| || || || ||||||||||| ||||| | |||
Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTC- 207294
Query 20108 CTTGTTACGTCCTCGCTTGTGC-GTGAGACTACTGAACAGGAAAGT-CAG--AACTATGG 20163
|||| || | || | ||| | | || | ||| ||| | ||| | | | || | ||
Sbjct 207293 CTTGGTAACTTCTAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGG 207234
Query 20164 TTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGG 20223
||| | ||||| ||||| ||||| || | || |||||||||||||||| ||| |||||
Sbjct 207233 TTAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGG 207174
Query 20224 ACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTC 20278
|| |||||||||||||| ||| ||||||||| |||||| ||||| |||||
Sbjct 207173 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT-TACACATCTTC 207120
>seq2280
Length=1098
Score = 154 bits (170), Expect = 4e-33
Identities = 176/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 20078 GGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAGAC 20136
|| || ||||||||||| ||||| ||||| |||| || | || | ||| | | || ||
Sbjct 1097 GGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAAC 1039
Query 20137 TACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAA 20196
|| ||| | ||| | || | ||||||| || | ||||| ||||| || |||||
Sbjct 1038 CACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAA 979
Query 20197 CATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAA 20256
|||||||||||||||||||| ||||| | |||||||||||||| ||| |||||||||
Sbjct 978 TATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAACAA 919
Query 20257 TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310
||||| ||||||||||| | | ||| ||||| || ||||| || |||||
Sbjct 918 CTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 865
Score = 114 bits (126), Expect = 4e-21
Identities = 96/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 20193 ATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCA 20252
|||| |||||||||||||||||||| ||||| | |||||||||||||| ||| |||||
Sbjct 830 ATAATATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCA 771
Query 20253 ACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 20310
|||| ||||| ||||||||||| | | ||| ||||| || ||||| || |||||
Sbjct 770 ACAACTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 713
>seq17562
Length=33771
Score = 147 bits (162), Expect = 6e-31
Identities = 187/255 (73%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 20003 ATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTG 20062
||| | |||||||| || || || ||||| || |||||||| || ||||| | || |
Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256
Query 20063 GCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCG 20122
||||||||| || || || ||||||||||| ||||| | ||| |||| || | || |
Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTC-CTTGGTAACTTCTAG 25197
Query 20123 CTTGTGC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGA 20181
||| | | || | || ||| | ||| | || | ||||||| || | |||||
Sbjct 25196 TTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGA 25137
Query 20182 AGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATA 20241
||||| || || || |||||||||| ||||| ||| ||||| || ||||||||||||||
Sbjct 25136 GGAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATA 25077
Query 20242 CGCTTCTTTCAACAA 20256
||| |||||||||
Sbjct 25076 TGCTAGTTTCAACAA 25062
Score = 84.2 bits (92), Expect = 7e-12
Identities = 100/133 (75%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 19982 ATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCAC 20041
||||||| ||| ||||| | |||| | |||||||| || || || ||||| || ||||||
Sbjct 25510 ATCTCGG-TACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 25452
Query 20042 CCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCAC 20101
| || ||||| | || | || ||||| ||||| || ||||||||||| |||||
Sbjct 25451 CTATTTCACATCTTAGGCCTAGCCTGTGTAAAAGGTGGCTCCCTATTCAGTGCTATGCAT 25392
Query 20102 GGTTCGCTTGTTA 20114
| ||| |||| ||
Sbjct 25391 GCTTC-CTTGGTA 25380
>seq1857
Length=125658
Score = 123 bits (136), Expect = 7e-24
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 20287 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 20346
|||||| || ||||| || ||||| | || || || | || ||||| || || ||
Sbjct 75468 CTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCT 75527
Query 20347 GAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTG 20406
|| |||||||| || ||||| || | | |||| | |||||||| ||| | |||||
Sbjct 75528 AAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTG 75587
Query 20407 GGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCA 20466
|||||| || ||||| |||||| || || | || || |||||| |||| ||||||||
Sbjct 75588 GGCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCA 75647
Query 20467 TAACTTCCCACTTGACCTTGC 20487
||||||||| || ||||| ||
Sbjct 75648 TAACTTCCCTCTAGACCTAGC 75668
>seq34978
Length=12172
Score = 113 bits (124), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 19510 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 19569
||||||| | ||| || | ||||||||||| |||| |||||||| |||||||
Sbjct 5450 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 5391
Query 19570 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAG 19628
|| | || ||| | || | |||| || |||||||| |||||||| ||||| ||||
Sbjct 5390 CCC-TACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAG 5332
Query 19629 TTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCA 19688
| ||||||||||| || || ||||| || || || || ||||| ||||||||||| |
Sbjct 5331 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTA 5272
Query 19689 TATCGGGAGCCGTCGTTCC 19707
| || || ||| | ||||
Sbjct 5271 TTTCCGGTGCCATTATTCC 5253
>seq10757
Length=79858
Score = 91.5 bits (100), Expect = 4e-14
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221
||||| | ||||| ||||| ||||| || || || ||| |||||||||||| ||| |||
Sbjct 73463 GGTTATAGATTTGGTCAAGAGGAAGAAACTTAGAATATCATAGCCGCTCATGCTTATTTT 73404
Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAA 20256
|| | |||||||||||||| ||| |||||||||
Sbjct 73403 GGCTGATTGATCTTCCAATAGTCTTGTTTCAACAA 73369
>seq24279
Length=4008
Score = 84.2 bits (92), Expect = 7e-12
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 20178 AAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCC 20237
|||| ||||| || || || |||||||||||||||| ||| ||||| || ||||||||||
Sbjct 1909 AAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCGATTGATCTTCC 1850
Query 20238 AATACGCTTCTTTCAACAA 20256
|||| | | |||||||||
Sbjct 1849 AATATGTTAGTTTCAACAA 1831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148716283938912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |